STRINGSTRING
LOC106518465 LOC106518465 LOC106518739 LOC106518739 lig4 lig4 LOC106519663 LOC106519663 aicda aicda LOC106520517 LOC106520517 atm atm ep300 ep300 card11 card11 LOC106520696 LOC106520696 LOC106521563 LOC106521563 ung ung LOC106535558 LOC106535558 LOC106535238 LOC106535238 LOC106535147 LOC106535147 LOC106535129 LOC106535129 itm2a itm2a bcl2 bcl2 prkcb prkcb exosc3 exosc3 cebpg cebpg msh6 msh6 LOC106532656 LOC106532656 LOC106532349 LOC106532349 LOC106531985 LOC106531985 fnip1 fnip1 itfg2 itfg2 LOC106529784 LOC106529784 LOC106529222 LOC106529222 malt1 malt1 LOC106528880 LOC106528880 zbtb1 zbtb1 nkx2-3 nkx2-3 phb phb LOC106527579 LOC106527579 LOC106527528 LOC106527528 LOC106527517 LOC106527517 LOC106527376 LOC106527376 LOC106526563 LOC106526563 LOC106526543 LOC106526543 ercc1 ercc1 LOC106526427 LOC106526427 LOC106526428 LOC106526428 LOC106526321 LOC106526321 LOC106526310 LOC106526310 LOC106525484 LOC106525484 batf batf LOC106524540 LOC106524540 LOC106524470 LOC106524470 LOC106523991 LOC106523991 tnfsf13b tnfsf13b cd79a cd79a LOC106523525 LOC106523525 pou2af1 pou2af1 vprbp vprbp LOC106523249 LOC106523249 rabl3 rabl3 LOC106522859 LOC106522859 cxcr5 cxcr5 LOC106522480 LOC106522480 rnf8 rnf8 LOC106522150 LOC106522150 atad5 atad5 nkx2-5 nkx2-5 LOC106536065 LOC106536065 LOC106510870 LOC106510870 kiaa1841 kiaa1841 LOC106511288 LOC106511288 LOC106511518 LOC106511518 cmtm7 cmtm7 LOC106511832 LOC106511832 LOC106512455 LOC106512455 sp3 sp3 LOC106514346 LOC106514346 sash3 sash3 bank1 bank1 LOC106515255 LOC106515255 dock10 dock10 rag2 rag2 mlh1 mlh1 rag1 rag1 tpd52 tpd52 LOC106515973 LOC106515973 LOC106516520 LOC106516520 msh2 msh2 ptprc ptprc lef1 lef1 skap2 skap2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106518465Transcription factor Sp3-like isoform X1. (653 aa)
LOC106518739Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (709 aa)
lig4DNA ligase. (909 aa)
LOC106519663Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (666 aa)
aicdaSingle-stranded DNA cytosine deaminase. (239 aa)
LOC106520517Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (704 aa)
atmNon-specific serine/threonine protein kinase. (3066 aa)
ep300Histone acetyltransferase p300. (2746 aa)
card11Caspase recruitment domain-containing protein 11 isoform X1. (1155 aa)
LOC106520696Caspase recruitment domain-containing protein 11-like. (754 aa)
LOC106521563Mucosa-associated lymphoid tissue lymphoma translocation protein 1 homolog. (831 aa)
ungUracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (299 aa)
LOC106535558Interferon a3-like. (185 aa)
LOC106535238Tumor necrosis factor ligand superfamily member 15-like; Belongs to the tumor necrosis factor family. (137 aa)
LOC106535147Uncharacterized protein LOC106535147. (235 aa)
LOC106535129E3 ubiquitin-protein ligase RNF168-like. (194 aa)
itm2aIntegral membrane protein 2A isoform X1. (251 aa)
bcl2Apoptosis regulator Bcl-2 isoform X1. (279 aa)
prkcbProtein kinase C beta type isoform X1. (550 aa)
exosc3Exosome complex component RRP40. (273 aa)
cebpgCCAAT/enhancer-binding protein gamma. (166 aa)
msh6DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1383 aa)
LOC106532656Homeobox protein Nkx-2.3-like isoform X1. (432 aa)
LOC106532349SAM and SH3 domain-containing protein 1-like. (758 aa)
LOC106531985Tumor necrosis factor receptor superfamily member 5-like. (305 aa)
fnip1Folliculin-interacting protein 1 isoform X1. (1274 aa)
itfg2Integrin-alpha FG-GAP repeat-containing protein 2. (431 aa)
LOC106529784Adapter protein CIKS-like. (391 aa)
LOC106529222GON-4-like protein isoform X1. (1601 aa)
malt1Mucosa-associated lymphoid tissue lymphoma translocation protein 1. (829 aa)
LOC106528880Lymphocyte cytosolic protein 2-like isoform X1. (353 aa)
zbtb1Zinc finger and BTB domain-containing protein 1. (676 aa)
nkx2-3Homeobox protein Nkx-2.3. (342 aa)
phbProhibitin. (271 aa)
LOC106527579Interleukin-7 receptor subunit alpha-like. (456 aa)
LOC106527528GON-4-like protein. (440 aa)
LOC106527517GON-4-like protein. (869 aa)
LOC106527376Uncharacterized protein LOC106527376. (330 aa)
LOC106526563Apoptosis regulator BAX-like isoform X1. (203 aa)
LOC106526543B-cell linker protein-like. (489 aa)
ercc1DNA excision repair protein ERCC-1. (354 aa)
LOC106526427Thioredoxin; Belongs to the thioredoxin family. (106 aa)
LOC106526428Thioredoxin; Belongs to the thioredoxin family. (105 aa)
LOC106526321Galectin. (132 aa)
LOC106526310Galectin. (139 aa)
LOC106525484dnaJ homolog subfamily B member 9-like. (217 aa)
batfBasic leucine zipper transcriptional factor ATF-like. (124 aa)
LOC106524540Protein kinase C alpha type-like. (150 aa)
LOC106524470Histone acetyltransferase p300-like. (1450 aa)
LOC106523991Protein lyl-1-like. (429 aa)
tnfsf13bTumor necrosis factor ligand superfamily member 13B isoform X1; Belongs to the tumor necrosis factor family. (272 aa)
cd79aB-cell antigen receptor complex-associated protein alpha chain. (221 aa)
LOC106523525dnaJ homolog subfamily B member 9-like. (234 aa)
pou2af1POU domain class 2-associating factor 1. (277 aa)
vprbpProtein VPRBP. (1559 aa)
LOC106523249Non-specific serine/threonine protein kinase. (319 aa)
rabl3Rab-like protein 3. (233 aa)
LOC106522859Protein VPRBP-like isoform X1. (1617 aa)
cxcr5C-X-C chemokine receptor type 5; Belongs to the G-protein coupled receptor 1 family. (358 aa)
LOC106522480Galectin. (127 aa)
rnf8E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (522 aa)
LOC106522150Serine-protein kinase ATM-like; Belongs to the PI3/PI4-kinase family. (391 aa)
atad5ATPase family AAA domain-containing protein 5 isoform X1. (1774 aa)
nkx2-5Homeobox protein Nkx-2.5. (204 aa)
LOC106536065Lymphocyte cytosolic protein 2-like. (560 aa)
LOC106510870E3 ubiquitin-protein ligase RNF168-like. (421 aa)
kiaa1841Uncharacterized protein KIAA1841 homolog. (708 aa)
LOC106511288Histone acetyltransferase p300-like. (2265 aa)
LOC106511518Transcription factor Sp3-like isoform X1. (653 aa)
cmtm7CKLF-like MARVEL transmembrane domain-containing protein 7. (442 aa)
LOC106511832DNA mismatch repair protein Mlh1-like. (214 aa)
LOC106512455Uncharacterized protein LOC106512455. (462 aa)
sp3Transcription factor Sp3. (672 aa)
LOC106514346Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like. (648 aa)
sash3SAM and SH3 domain-containing protein 3. (387 aa)
bank1B-cell scaffold protein with ankyrin repeats. (554 aa)
LOC106515255ATPase family AAA domain-containing protein 5-like. (951 aa)
dock10LOW QUALITY PROTEIN: dedicator of cytokinesis protein 10 isoform X1; Belongs to the DOCK family. (2186 aa)
rag2V(D)J recombination-activating protein 2. (532 aa)
mlh1DNA mismatch repair protein Mlh1 isoform X1. (743 aa)
rag1V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...] (1067 aa)
tpd52Tumor protein D52 isoform X1. (186 aa)
LOC106515973Tumor necrosis factor ligand superfamily member 13B-like; Belongs to the tumor necrosis factor family. (235 aa)
LOC106516520Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (672 aa)
msh2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (934 aa)
ptprcReceptor-type tyrosine-protein phosphatase C. (863 aa)
lef1Lymphoid enhancer-binding factor 1 isoform X1. (380 aa)
skap2Src kinase-associated phosphoprotein 2. (347 aa)
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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