STRINGSTRING
nsun4 nsun4 rpl17 rpl17 mrps27 mrps27 mrpl40 mrpl40 rpl7 rpl7 rpl21 rpl21 mrpl4 mrpl4 mrps6 mrps6 LOC106512394 LOC106512394 LOC106512148 LOC106512148 LOC106511611 LOC106511611 mrpl47 mrpl47 mrps35 mrps35 mrps23 mrps23 mrpl9 mrpl9 rps15 rps15 mrps28 mrps28 mrpl43 mrpl43 mrpl52 mrpl52 mrpl16 mrpl16 gnb2l1 gnb2l1 mrps14 mrps14 mrpl27 mrpl27 ndufab1 ndufab1 rpl12 rpl12 rps20 rps20 rpl15 rpl15 mrpl48 mrpl48 eif2a eif2a mrpl36 mrpl36 mrps18b mrps18b rpl8 rpl8 dap3 dap3 LOC106531571 LOC106531571 mrps5 mrps5 rps28 rps28 rpl27a rpl27a LOC106530376 LOC106530376 ict1 ict1 rpl5 rpl5 mrpl12 mrpl12 rps3 rps3 mrpl21 mrpl21 mrpl45 mrpl45 mrpl51 mrpl51 mrps30 mrps30 mrpl32 mrpl32 rps18 rps18 LOC106528370 LOC106528370 LOC106528159 LOC106528159 mrpl13 mrpl13 mrpl28 mrpl28 LOC106527632 LOC106527632 rpl7l1 rpl7l1 mrps12 mrps12 mrps33 mrps33 LOC106526859 LOC106526859 mrps24 mrps24 rps3a rps3a rps21 rps21 rpl10a rpl10a fance fance rps23 rps23 rpl27 rpl27 rpl14 rpl14 mrps15 mrps15 mrpl39 mrpl39 mrpl44 mrpl44 mrps26 mrps26 mrpl55 mrpl55 mrpl17 mrpl17 eif2d eif2d rpl10 rpl10 mrpl49 mrpl49 mrps9 mrps9 mrps25 mrps25 mrpl46 mrpl46 mrps11 mrps11 mrpl2 mrpl2 mrps22 mrps22 rpl13a rpl13a mrps7 mrps7 rps2 rps2 LOC106522039 LOC106522039 mrpl10 mrpl10 LOC106521912 LOC106521912 mrpl1 mrpl1 mrpl42 mrpl42 LOC106521571 LOC106521571 mrpl54 mrpl54 mrpl35 mrpl35 rpl4 rpl4 LOC106520876 LOC106520876 mrps21 mrps21 rps5 rps5 rpl18 rpl18 rps9 rps9 mrps18a mrps18a rpl6 rpl6 mrps17 mrps17 mrpl30 mrpl30 aurkaip1 aurkaip1 uba52 uba52 mrpl41 mrpl41 LOC106518873 LOC106518873 LOC106518874 LOC106518874 mrpl33 mrpl33 mrps10 mrps10 mrpl19 mrpl19 rpl35 rpl35 rps29 rps29 fau fau rplp1 rplp1 mrpl24 mrpl24 rps26 rps26 rpl37a rpl37a rpsa rpsa LOC106517841 LOC106517841 LOC106517678 LOC106517678 mrpl15 mrpl15 mrpl18 mrpl18 rps6 rps6 LOC106516986 LOC106516986 mrps31 mrps31 rpl7a rpl7a rpl28 rpl28 rpl37 rpl37 dhx29 dhx29 mrpl20 mrpl20 mrpl14 mrpl14 rpl30 rpl30 mrpl53 mrpl53 zcchc17 zcchc17 mrpl3 mrpl3 LOC106515665 LOC106515665 mrpl11 mrpl11 rps24 rps24 rpl29 rpl29 mrpl22 mrpl22 rpl23a rpl23a nsun3 nsun3 mrps16 mrps16 mrps18c mrps18c
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nsun45-methylcytosine rRNA methyltransferase NSUN4; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (402 aa)
rpl1760S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (184 aa)
mrps2728S ribosomal protein S27, mitochondrial. (437 aa)
mrpl4039S ribosomal protein L40, mitochondrial. (203 aa)
rpl760S ribosomal protein L7. (245 aa)
rpl2160S ribosomal protein L21. (160 aa)
mrpl439S ribosomal protein L4, mitochondrial. (304 aa)
mrps628S ribosomal protein S6, mitochondrial. (121 aa)
LOC10651239439S ribosomal protein L38, mitochondrial-like. (126 aa)
LOC10651214828S ribosomal protein S29, mitochondrial-like. (213 aa)
LOC10651161139S ribosomal protein L38, mitochondrial-like. (387 aa)
mrpl4739S ribosomal protein L47, mitochondrial. (257 aa)
mrps3528S ribosomal protein S35, mitochondrial. (333 aa)
mrps2328S ribosomal protein S23, mitochondrial. (155 aa)
mrpl939S ribosomal protein L9, mitochondrial. (262 aa)
rps1540S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
mrps2828S ribosomal protein S28, mitochondrial. (203 aa)
mrpl4339S ribosomal protein L43, mitochondrial. (154 aa)
mrpl5239S ribosomal protein L52, mitochondrial. (130 aa)
mrpl1639S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family. (258 aa)
gnb2l1Guanine nucleotide-binding protein subunit beta-2-like 1. (317 aa)
mrps1428S ribosomal protein S14, mitochondrial. (138 aa)
mrpl2739S ribosomal protein L27, mitochondrial. (156 aa)
ndufab1Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (196 aa)
rpl1260S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
rps2040S ribosomal protein S20 isoform X1. (119 aa)
rpl15Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
mrpl4839S ribosomal protein L48, mitochondrial. (210 aa)
eif2aEukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (620 aa)
mrpl36Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (120 aa)
mrps18b28S ribosomal protein S18b, mitochondrial. (247 aa)
rpl860S ribosomal protein L8. (257 aa)
dap328S ribosomal protein S29, mitochondrial. (397 aa)
LOC10653157140S ribosomal protein S27. (84 aa)
mrps528S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family. (423 aa)
rps2840S ribosomal protein S28. (69 aa)
rpl27a60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (148 aa)
LOC10653037660S acidic ribosomal protein P2-like; Belongs to the eukaryotic ribosomal protein P1/P2 family. (116 aa)
ict1peptidyl-tRNA hydrolase ICT1, mitochondrial. (191 aa)
rpl560S ribosomal protein L5. (304 aa)
mrpl1239S ribosomal protein L12, mitochondrial. (195 aa)
rps340S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (245 aa)
mrpl2139S ribosomal protein L21, mitochondrial. (193 aa)
mrpl4539S ribosomal protein L45, mitochondrial. (303 aa)
mrpl5139S ribosomal protein L51, mitochondrial. (131 aa)
mrps3028S ribosomal protein S30, mitochondrial. (424 aa)
mrpl3239S ribosomal protein L32, mitochondrial. (177 aa)
rps1840S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
LOC106528370Fibrous sheath CABYR-binding protein-like isoform X1. (391 aa)
LOC106528159Transcription termination factor 4, mitochondrial-like. (352 aa)
mrpl1339S ribosomal protein L13, mitochondrial. (179 aa)
mrpl2839S ribosomal protein L28, mitochondrial. (263 aa)
LOC106527632Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (194 aa)
rpl7l160S ribosomal protein L7-like 1. (246 aa)
mrps1228S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family. (141 aa)
mrps3328S ribosomal protein S33, mitochondrial. (106 aa)
LOC106526859Uncharacterized protein LOC106526859. (1216 aa)
mrps2428S ribosomal protein S24, mitochondrial. (171 aa)
rps3a40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
rps2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
rpl10aRibosomal protein; Belongs to the universal ribosomal protein uL1 family. (216 aa)
fanceFanconi anemia group E protein isoform X1. (517 aa)
rps2340S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
rpl2760S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
rpl1460S ribosomal protein L14. (140 aa)
mrps1528S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family. (249 aa)
mrpl3939S ribosomal protein L39, mitochondrial. (331 aa)
mrpl4439S ribosomal protein L44, mitochondrial. (328 aa)
mrps2628S ribosomal protein S26, mitochondrial. (207 aa)
mrpl5539S ribosomal protein L55, mitochondrial. (138 aa)
mrpl1739S ribosomal protein L17, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family. (165 aa)
eif2dEukaryotic translation initiation factor 2D. (589 aa)
rpl1060S ribosomal protein L10. (215 aa)
mrpl4939S ribosomal protein L49, mitochondrial. (177 aa)
mrps928S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family. (380 aa)
mrps2528S ribosomal protein S25, mitochondrial. (173 aa)
mrpl4639S ribosomal protein L46, mitochondrial. (292 aa)
mrps1128S ribosomal protein S11, mitochondrial; Belongs to the universal ribosomal protein uS11 family. (196 aa)
mrpl239S ribosomal protein L2, mitochondrial. (297 aa)
mrps2228S ribosomal protein S22, mitochondrial. (255 aa)
rpl13a60S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (205 aa)
mrps728S ribosomal protein S7, mitochondrial. (229 aa)
rps240S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (280 aa)
LOC10652203960S ribosomal protein L5. (297 aa)
mrpl1039S ribosomal protein L10, mitochondrial. (262 aa)
LOC10652191260S ribosomal protein L26. (145 aa)
mrpl139S ribosomal protein L1, mitochondrial. (311 aa)
mrpl4239S ribosomal protein L42, mitochondrial. (144 aa)
LOC10652157140S ribosomal protein S27-like. (84 aa)
mrpl5439S ribosomal protein L54, mitochondrial isoform X1. (136 aa)
mrpl3539S ribosomal protein L35, mitochondrial. (176 aa)
rpl460S ribosomal protein L4. (369 aa)
LOC10652087640S ribosomal protein S27. (84 aa)
mrps2128S ribosomal protein S21, mitochondrial. (87 aa)
rps540S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
rpl1860S ribosomal protein L18. (240 aa)
rps940S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
mrps18a28S ribosomal protein S18a, mitochondrial. (208 aa)
rpl660S ribosomal protein L6. (259 aa)
mrps1728S ribosomal protein S17, mitochondrial. (146 aa)
mrpl3039S ribosomal protein L30, mitochondrial. (162 aa)
aurkaip1Aurora kinase A-interacting protein. (208 aa)
uba52ubiquitin-60S ribosomal protein L40. (128 aa)
mrpl4139S ribosomal protein L41, mitochondrial. (135 aa)
LOC106518873Ubiquitin-like. (76 aa)
LOC10651887460S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (403 aa)
mrpl3339S ribosomal protein L33, mitochondrial. (66 aa)
mrps1028S ribosomal protein S10, mitochondrial. (203 aa)
mrpl1939S ribosomal protein L19, mitochondrial isoform X1. (282 aa)
rpl3560S ribosomal protein L35. (123 aa)
rps2940S ribosomal protein S29. (56 aa)
fau40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
rplp160S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
mrpl2439S ribosomal protein L24, mitochondrial. (216 aa)
rps2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (129 aa)
rpl37a60S ribosomal protein L37a. (97 aa)
rpsa40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (307 aa)
LOC106517841Proteoglycan 4-like. (537 aa)
LOC10651767860S acidic ribosomal protein P2-like; Belongs to the eukaryotic ribosomal protein P1/P2 family. (116 aa)
mrpl1539S ribosomal protein L15, mitochondrial. (296 aa)
mrpl1839S ribosomal protein L18, mitochondrial isoform X1. (193 aa)
rps640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
LOC106516986Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (195 aa)
mrps3128S ribosomal protein S31, mitochondrial. (418 aa)
rpl7a60S ribosomal protein L7a. (266 aa)
rpl2860S ribosomal protein L28. (137 aa)
rpl37Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
dhx29ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1386 aa)
mrpl2039S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family. (148 aa)
mrpl1439S ribosomal protein L14, mitochondrial isoform X1. (170 aa)
rpl3060S ribosomal protein L30. (116 aa)
mrpl5339S ribosomal protein L53, mitochondrial. (112 aa)
zcchc17Nucleolar protein of 40 kDa. (244 aa)
mrpl339S ribosomal protein L3, mitochondrial. (339 aa)
LOC10651566539S ribosomal protein L23, mitochondrial-like. (160 aa)
mrpl1139S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family. (208 aa)
rps2440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (132 aa)
rpl2960S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (65 aa)
mrpl2239S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family. (208 aa)
rpl23a60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (155 aa)
nsun3Putative methyltransferase NSUN3; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (440 aa)
mrps1628S ribosomal protein S16, mitochondrial. (138 aa)
mrps18c28S ribosomal protein S18c, mitochondrial. (128 aa)
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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