STRINGSTRING
LOC106521295 LOC106521295 hmgcs1 hmgcs1 ggps1 ggps1 fdft1 fdft1 LOC106527595 LOC106527595 rusc1 rusc1 fdps fdps
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106521295Presqualene diphosphate phosphatase-like. (267 aa)
hmgcs13-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (515 aa)
ggps1Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. (311 aa)
fdft1Squalene synthase isoform X1. (511 aa)
LOC106527595Presqualene diphosphate phosphatase-like. (160 aa)
rusc1RUN and SH3 domain-containing protein 1. (1814 aa)
fdpsFarnesyl pyrophosphate synthase isoform X1; Belongs to the FPP/GGPP synthase family. (392 aa)
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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