STRINGSTRING
LOC106510960 LOC106510960 LOC106513751 LOC106513751 med1 med1 numa1 numa1 LOC106518122 LOC106518122 LOC106527385 LOC106527385 ptch1 ptch1 etv4 etv4 kdf1 kdf1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106510960Nuclear mitotic apparatus protein 1-like. (669 aa)
LOC106513751Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (370 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1785 aa)
numa1Nuclear mitotic apparatus protein 1 isoform X1. (1091 aa)
LOC106518122Transmembrane protein 79-like. (425 aa)
LOC106527385Core histone macro-H2A.1; Belongs to the histone H2A family. (369 aa)
ptch1Protein patched homolog 1. (1554 aa)
etv4ETS translocation variant 4. (486 aa)
kdf1Keratinocyte differentiation factor 1. (388 aa)
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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