STRINGSTRING
LOC106530360 LOC106530360 scfd2 scfd2 rab13 rab13 LOC106531801 LOC106531801 LOC106532638 LOC106532638 LOC106533470 LOC106533470 LOC106534321 LOC106534321 plek plek rab10 rab10 LOC106534959 LOC106534959 uso1 uso1 LOC106535699 LOC106535699 LOC106536554 LOC106536554 LOC106536584 LOC106536584 LOC106536987 LOC106536987 LOC106512192 LOC106512192 LOC106512827 LOC106512827 LOC106513533 LOC106513533 stx16 stx16 unc13b unc13b rab8b rab8b LOC106515017 LOC106515017 stx17 stx17 exoc4 exoc4 stx12 stx12 LOC106515230 LOC106515230 stx8 stx8 stx5 stx5 LOC106516362 LOC106516362 LOC106516875 LOC106516875 LOC106516877 LOC106516877 rab3d rab3d rabepk rabepk LOC106518347 LOC106518347 vps18 vps18 rab3a rab3a stx19 stx19 LOC106519752 LOC106519752 LOC106519789 LOC106519789 LOC106520249 LOC106520249 rab8a rab8a vps11 vps11 stx4 stx4 rab15 rab15 LOC106525446 LOC106525446 rab12 rab12 LOC106526237 LOC106526237 LOC106511381 LOC106511381 LOC106511230 LOC106511230 LOC106511255 LOC106511255 LOC106526242 LOC106526242 LOC106526424 LOC106526424 LOC106526510 LOC106526510 LOC106526546 LOC106526546 unc13c unc13c stx10 stx10 stx1b stx1b stx2 stx2 cln3 cln3 exoc2 exoc2 stxbp2 stxbp2 stxbp3 stxbp3 cep83 cep83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106530360Rab9 effector protein with kelch motifs-like. (246 aa)
scfd2Sec1 family domain-containing protein 2 isoform X1; Belongs to the STXBP/unc-18/SEC1 family. (690 aa)
rab13Ras-related protein Rab-13 isoform X1. (200 aa)
LOC106531801Syntaxin-7-like; Belongs to the syntaxin family. (256 aa)
LOC106532638Uncharacterized protein LOC106532638. (351 aa)
LOC106533470syntaxin-1A-like isoform X1; Belongs to the syntaxin family. (330 aa)
LOC106534321Syntaxin-binding protein 1-like; Belongs to the STXBP/unc-18/SEC1 family. (603 aa)
plekPleckstrin. (351 aa)
rab10Ras-related protein Rab-10. (200 aa)
LOC106534959Ras-related protein Rab-3C-like. (219 aa)
uso1General vesicular transport factor p115 isoform X1. (964 aa)
LOC106535699Centrosomal protein of 83 kDa-like. (745 aa)
LOC106536554Syntaxin-11-like; Belongs to the syntaxin family. (296 aa)
LOC106536584Syntaxin-binding protein 1 isoform X1; Belongs to the STXBP/unc-18/SEC1 family. (603 aa)
LOC106536987Syntaxin-3-like; Belongs to the syntaxin family. (285 aa)
LOC106512192Centrosomal protein of 83 kDa-like. (121 aa)
LOC106512827Syntaxin-6-like. (100 aa)
LOC106513533Syntaxin-2-like. (274 aa)
stx16Syntaxin-16 isoform X1; Belongs to the syntaxin family. (322 aa)
unc13bProtein unc-13 homolog B isoform X1. (5020 aa)
rab8bRas-related protein Rab-8B. (207 aa)
LOC106515017Protein unc-13 homolog A-like. (1823 aa)
stx17Syntaxin-17; Belongs to the syntaxin family. (288 aa)
exoc4Exocyst complex component 4. (980 aa)
stx12Syntaxin-12; Belongs to the syntaxin family. (267 aa)
LOC106515230Ras-related protein Rab-3D-like. (221 aa)
stx8Syntaxin-8. (238 aa)
stx5Syntaxin-5 isoform X1; Belongs to the syntaxin family. (327 aa)
LOC106516362Syntaxin-3-like isoform X1; Belongs to the syntaxin family. (292 aa)
LOC106516875Ras-related protein Rab-8A. (206 aa)
LOC106516877Ras-related protein Rab-8A-like. (108 aa)
rab3dRas-related protein Rab-3D. (275 aa)
rabepkRab9 effector protein with kelch motifs. (350 aa)
LOC106518347LOW QUALITY PROTEIN: protein unc-13 homolog C-like. (679 aa)
vps18Vacuolar protein sorting-associated protein 18 homolog. (982 aa)
rab3aRas-related protein Rab-3A. (219 aa)
stx19Syntaxin-19. (299 aa)
LOC106519752Syntaxin-11-like. (300 aa)
LOC106519789Syntaxin-11-like. (298 aa)
LOC106520249Ras-related protein Rab-15-like isoform X1. (179 aa)
rab8aRas-related protein Rab-8A. (205 aa)
vps11Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. (923 aa)
stx4Syntaxin-4; Belongs to the syntaxin family. (296 aa)
rab15Ras-related protein Rab-15. (213 aa)
LOC106525446Uncharacterized protein LOC106525446. (3418 aa)
rab12Ras-related protein Rab-12. (243 aa)
LOC106526237t-SNARE domain-containing protein 1-like. (141 aa)
LOC106511381Ras-related protein Rab-15-like. (89 aa)
LOC106511230Ras-related protein Rab-8B isoform X1. (207 aa)
LOC106511255Protein unc-13 homolog B-like. (185 aa)
LOC106526242t-SNARE domain-containing protein 1-like; Belongs to the syntaxin family. (148 aa)
LOC106526424Protein unc-13 homolog A-like. (1877 aa)
LOC106526510Syntaxin-6-like; Belongs to the syntaxin family. (243 aa)
LOC106526546Ras-related protein Rab-3B-like. (123 aa)
unc13cProtein unc-13 homolog C isoform X1. (2578 aa)
stx10Syntaxin-10. (241 aa)
stx1bsyntaxin-1B; Belongs to the syntaxin family. (288 aa)
stx2Syntaxin-2; Belongs to the syntaxin family. (293 aa)
cln3Battenin. (434 aa)
exoc2Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. (921 aa)
stxbp2Syntaxin-binding protein 2; Belongs to the STXBP/unc-18/SEC1 family. (585 aa)
stxbp3Syntaxin-binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (593 aa)
cep83Centrosomal protein of 83 kDa. (367 aa)
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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