STRINGSTRING
sema4c sema4c cep41 cep41 LOC106536369 LOC106536369 smo smo LOC106535786 LOC106535786 sema4g sema4g LOC106535330 LOC106535330 LOC106534862 LOC106534862 LOC106534785 LOC106534785 LOC106534611 LOC106534611 LOC106534064 LOC106534064 LOC106533925 LOC106533925 LOC106532754 LOC106532754 LOC106532668 LOC106532668 LOC106532673 LOC106532673 LOC106532530 LOC106532530 LOC106532337 LOC106532337 LOC106532277 LOC106532277 phactr1 phactr1 LOC106531940 LOC106531940 leo1 leo1 pdcd6 pdcd6 med13 med13 LOC106530806 LOC106530806 tbx10 tbx10 sema6d sema6d LOC106530112 LOC106530112 LOC106530016 LOC106530016 LOC106529653 LOC106529653 LOC106529465 LOC106529465 rcc2 rcc2 pef1 pef1 LOC106528191 LOC106528191 LOC106527902 LOC106527902 ednra ednra LOC106527374 LOC106527374 LOC106527162 LOC106527162 LOC106526881 LOC106526881 LOC106526714 LOC106526714 fgf19 fgf19 fgf3 fgf3 wdr11 wdr11 LOC106526325 LOC106526325 LOC106526265 LOC106526265 sema3c sema3c alx1 alx1 phox2b phox2b tapt1 tapt1 ret ret LOC106524998 LOC106524998 LOC106524760 LOC106524760 tbx1 tbx1 LOC106524472 LOC106524472 LOC106524060 LOC106524060 LOC106523165 LOC106523165 klhl12 klhl12 LOC106522518 LOC106522518 LOC106522339 LOC106522339 colec11 colec11 wnt7b wnt7b coro1c coro1c LOC106521594 LOC106521594 LOC106521264 LOC106521264 nrp1 nrp1 LOC106520814 LOC106520814 sox10 sox10 LOC106520355 LOC106520355 sema3a sema3a sema3e sema3e LOC106520090 LOC106520090 dicer1 dicer1 radil radil sema4b sema4b sox9 sox9 kbtbd8 kbtbd8 sema4d sema4d LOC106518172 LOC106518172 gbx2 gbx2 pdgfrb pdgfrb LOC106517336 LOC106517336 LOC106517290 LOC106517290 LOC106516883 LOC106516883 ptprc ptprc sema3f sema3f anxa6 anxa6 LOC106515931 LOC106515931 LOC106515252 LOC106515252 LOC106515026 LOC106515026 LOC106514759 LOC106514759 LOC106514699 LOC106514699 med12 med12 LOC106514467 LOC106514467 gdnf gdnf sema7a sema7a LOC106514333 LOC106514333 sema3d sema3d sema6b sema6b LOC106513815 LOC106513815 sema6a sema6a sema5a sema5a sh3pxd2a sh3pxd2a sema3g sema3g sema3b sema3b dlx2 dlx2 LOC106512163 LOC106512163 LOC106511984 LOC106511984 LOC106511817 LOC106511817 LOC106511594 LOC106511594 LOC106511504 LOC106511504 LOC106511206 LOC106511206 htr2b htr2b LOC106511029 LOC106511029 LOC106510774 LOC106510774
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sema4csemaphorin-4C; Belongs to the semaphorin family. (868 aa)
cep41Centrosomal protein of 41 kDa. (365 aa)
LOC106536369Wilms tumor protein 1-interacting protein homolog. (682 aa)
smoSmoothened homolog; Belongs to the G-protein coupled receptor Fz/Smo family. (813 aa)
LOC106535786Phosphatase and actin regulator. (872 aa)
sema4gsemaphorin-4G; Belongs to the semaphorin family. (914 aa)
LOC106535330Transmembrane anterior posterior transformation protein 1 homolog. (169 aa)
LOC106534862Histone-lysine N-methyltransferase SETD2-like. (2210 aa)
LOC106534785semaphorin-6D-like isoform X1; Belongs to the semaphorin family. (1160 aa)
LOC106534611Phosphatase and actin regulator 4A-like. (970 aa)
LOC106534064Cadherin-2-like; Cadherins are calcium-dependent cell adhesion proteins. (907 aa)
LOC106533925Phosphatase and actin regulator. (596 aa)
LOC106532754Forkhead box C1-A-like. (437 aa)
LOC106532668Transmembrane anterior posterior transformation protein 1 homolog. (612 aa)
LOC106532673Forkhead box C1-A-like. (473 aa)
LOC106532530Ras-associating and dilute domain-containing protein-like. (1253 aa)
LOC106532337Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (350 aa)
LOC106532277Cadherin-2-like; Cadherins are calcium-dependent cell adhesion proteins. (911 aa)
phactr1Phosphatase and actin regulator. (585 aa)
LOC106531940semaphorin-4G-like; Belongs to the semaphorin family. (895 aa)
leo1RNA polymerase-associated protein LEO1. (743 aa)
pdcd6Programmed cell death protein 6. (185 aa)
med13Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (2150 aa)
LOC106530806semaphorin-6D-like; Belongs to the semaphorin family. (861 aa)
tbx10T-box transcription factor TBX10. (317 aa)
sema6dsemaphorin-6D isoform X1; Belongs to the semaphorin family. (1105 aa)
LOC106530112Endothelin-3-like. (219 aa)
LOC106530016Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family. (356 aa)
LOC106529653semaphorin-5B-like. (1098 aa)
LOC106529465Histone-lysine N-methyltransferase SETD2-like. (489 aa)
rcc2Protein RCC2. (494 aa)
pef1Peflin isoform X1. (260 aa)
LOC106528191Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (353 aa)
LOC106527902semaphorin-5B-like. (1105 aa)
ednraEndothelin-1 receptor; Belongs to the G-protein coupled receptor 1 family. (437 aa)
LOC106527374semaphorin-4A-like; Belongs to the semaphorin family. (607 aa)
LOC106527162semaphorin-3F-like; Belongs to the semaphorin family. (750 aa)
LOC106526881Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (349 aa)
LOC106526714semaphorin-6D-like; Belongs to the semaphorin family. (1084 aa)
fgf19Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (212 aa)
fgf3Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (249 aa)
wdr11WD repeat-containing protein 11. (1240 aa)
LOC106526325semaphorin-4E-like; Belongs to the semaphorin family. (751 aa)
LOC106526265semaphorin-6B-like; Belongs to the semaphorin family. (907 aa)
sema3csemaphorin-3C; Belongs to the semaphorin family. (763 aa)
alx1ALX homeobox protein 1. (321 aa)
phox2bPaired mesoderm homeobox protein 2B. (285 aa)
tapt1Transmembrane anterior posterior transformation protein 1 homolog. (572 aa)
retProto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. (1108 aa)
LOC106524998semaphorin-4F-like; Belongs to the semaphorin family. (839 aa)
LOC106524760Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family. (359 aa)
tbx1T-box transcription factor TBX1 isoform X1. (521 aa)
LOC106524472SH3 and PX domain-containing protein 2A-like. (1161 aa)
LOC106524060semaphorin-7A-like isoform X1; Belongs to the semaphorin family. (641 aa)
LOC106523165Fibronectin-like. (2512 aa)
klhl12Kelch-like protein 12. (613 aa)
LOC106522518semaphorin-7A-like; Belongs to the semaphorin family. (550 aa)
LOC106522339semaphorin-3D-like; Belongs to the semaphorin family. (779 aa)
colec11Collectin-11 isoform X1. (284 aa)
wnt7bProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (356 aa)
coro1cCoronin; Belongs to the WD repeat coronin family. (1122 aa)
LOC106521594Collectin-10-like. (313 aa)
LOC106521264semaphorin-4E-like; Belongs to the semaphorin family. (723 aa)
nrp1Neuropilin; Belongs to the neuropilin family. (881 aa)
LOC106520814semaphorin-4A-like isoform X1; Belongs to the semaphorin family. (821 aa)
sox10Transcription factor SOX-10 isoform X1. (487 aa)
LOC106520355Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (2121 aa)
sema3asemaphorin-3A; Belongs to the semaphorin family. (758 aa)
sema3esemaphorin-3E; Belongs to the semaphorin family. (795 aa)
LOC106520090Cytochrome P450 26B1-like; Belongs to the cytochrome P450 family. (535 aa)
dicer1Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily. (1846 aa)
radilRas-associating and dilute domain-containing protein. (1164 aa)
sema4bsemaphorin-4B; Belongs to the semaphorin family. (837 aa)
sox9Transcription factor SOX-9. (480 aa)
kbtbd8Kelch repeat and BTB domain-containing protein 8. (604 aa)
sema4dsemaphorin-4D isoform X1; Belongs to the semaphorin family. (908 aa)
LOC106518172Retinal homeobox protein Rx3-like. (313 aa)
gbx2Homeobox protein GBX-2. (336 aa)
pdgfrbPlatelet-derived growth factor receptor beta; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1095 aa)
LOC106517336Transcription factor Sox-9-A-like. (207 aa)
LOC106517290Cadherin-2-like isoform X1; Cadherins are calcium-dependent cell adhesion proteins. (925 aa)
LOC106516883Neurturin-like. (226 aa)
ptprcReceptor-type tyrosine-protein phosphatase C. (863 aa)
sema3fsemaphorin-3F; Belongs to the semaphorin family. (789 aa)
anxa6Annexin. (665 aa)
LOC106515931Nucleolar and coiled-body phosphoprotein 1-like. (970 aa)
LOC106515252Transcription factor Sox-10-like. (498 aa)
LOC106515026Forkhead box protein D5-B-like. (297 aa)
LOC106514759Semaphorin-3ab-like; Belongs to the semaphorin family. (864 aa)
LOC106514699Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family. (462 aa)
med12Mediator of RNA polymerase II transcription subunit 12 isoform X1. (2155 aa)
LOC106514467Coronin; Belongs to the WD repeat coronin family. (1054 aa)
gdnfGlial cell line-derived neurotrophic factor; Neurotrophic factor that enhances survival and morphological differentiation of dopaminergic neurons and increases their high- affinity dopamine uptake. (237 aa)
sema7asemaphorin-7A; Belongs to the semaphorin family. (659 aa)
LOC106514333semaphorin-4B-like; Belongs to the semaphorin family. (829 aa)
sema3dsemaphorin-3D isoform X1; Belongs to the semaphorin family. (805 aa)
sema6bsemaphorin-6B; Belongs to the semaphorin family. (876 aa)
LOC106513815Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family. (419 aa)
sema6asemaphorin-6A isoform X1; Belongs to the semaphorin family. (1019 aa)
sema5asemaphorin-5A. (1078 aa)
sh3pxd2aSH3 and PX domain-containing protein 2A isoform X1. (1097 aa)
sema3gsemaphorin-3G; Belongs to the semaphorin family. (784 aa)
sema3bsemaphorin-3B isoform X1; Belongs to the semaphorin family. (804 aa)
dlx2Homeobox protein DLX-2. (276 aa)
LOC106512163semaphorin-4A-like. (127 aa)
LOC106511984Nucleolar and spindle-associated protein 1-like. (291 aa)
LOC106511817Kelch-like protein 23. (538 aa)
LOC106511594Transcription factor Sox-9-A-like. (491 aa)
LOC106511504Nucleolar and spindle-associated protein 1-like. (438 aa)
LOC106511206Phosphatase and actin regulator. (233 aa)
htr2b5-hydroxytryptamine receptor 2B. (466 aa)
LOC106511029semaphorin-4F-like. (117 aa)
LOC106510774semaphorin-5B-like. (980 aa)
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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