23 items (Austrofundulus limnaeus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sumo1	Small ubiquitin-related modifier. (101 aa)
	LOC106531136	T-cell acute lymphocytic leukemia protein 2-like. (172 aa)
	LOC106523991	Protein lyl-1-like. (429 aa)
	LOC106535175	Protein KRI1 homolog. (588 aa)
	sae1	SUMO-activating enzyme subunit 1. (345 aa)
	cbfb	Core-binding factor subunit beta-like. (188 aa)
	ube2i	SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	LOC106520693	Calponin homology domain-containing protein DDB_G0272472-like. (251 aa)
	cdk5rap3	CDK5 regulatory subunit-associated protein 3. (505 aa)
	sumo2	Small ubiquitin-related modifier. (95 aa)
	mib1	E3 ubiquitin-protein ligase MIB1 isoform X1. (1041 aa)
	LOC106511518	Transcription factor Sp3-like isoform X1. (653 aa)
	LOC106512523	T-cell acute lymphocytic leukemia protein 1-like. (239 aa)
	sp3	Transcription factor Sp3. (672 aa)
	LOC106523318	Small ubiquitin-related modifier. (94 aa)
	LOC106513240	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (212 aa)
	LOC106515271	Small ubiquitin-related modifier. (96 aa)
	rps24	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (132 aa)
	adar	Double-stranded RNA-specific adenosine deaminase isoform X1. (1335 aa)
	LOC106517863	Protein KRI1 homolog. (764 aa)
	LOC106518458	Small ubiquitin-related modifier. (94 aa)
	LOC106535057	T-cell acute lymphocytic leukemia protein 1. (234 aa)
	LOC106518465	Transcription factor Sp3-like isoform X1. (653 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106511518	sumo1	A0A2I4AJR0	A0A2I4CS05	Transcription factor Sp3-like isoform X1.	Small ubiquitin-related modifier.	0.427
LOC106512523	cbfb	A0A2I4AM56	A0A2I4D8S0	T-cell acute lymphocytic leukemia protein 1-like.	Core-binding factor subunit beta-like.	0.613
LOC106515271	sae1	A0A2I4AY68	A0A2I4D6F0	Small ubiquitin-related modifier.	SUMO-activating enzyme subunit 1.	0.909
LOC106515271	sumo1	A0A2I4AY68	A0A2I4CS05	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.655
LOC106515271	ube2i	A0A2I4AY68	A0A2I4BKP4	Small ubiquitin-related modifier.	SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.	0.984
LOC106518458	sae1	A0A2I4BBU9	A0A2I4D6F0	Small ubiquitin-related modifier.	SUMO-activating enzyme subunit 1.	0.892
LOC106518458	sumo1	A0A2I4BBU9	A0A2I4CS05	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.655
LOC106518458	ube2i	A0A2I4BBU9	A0A2I4BKP4	Small ubiquitin-related modifier.	SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.	0.984
LOC106518465	sumo1	A0A2I4BBV8	A0A2I4CS05	Transcription factor Sp3-like isoform X1.	Small ubiquitin-related modifier.	0.427
LOC106523318	sae1	A0A2I4BWR1	A0A2I4D6F0	Small ubiquitin-related modifier.	SUMO-activating enzyme subunit 1.	0.892
LOC106523318	sumo1	A0A2I4BWR1	A0A2I4CS05	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.655
LOC106523318	ube2i	A0A2I4BWR1	A0A2I4BKP4	Small ubiquitin-related modifier.	SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.	0.984
LOC106523991	cbfb	A0A2I4BZ72	A0A2I4D8S0	Protein lyl-1-like.	Core-binding factor subunit beta-like.	0.722
LOC106531136	cbfb	A0A2I4CQV9	A0A2I4D8S0	T-cell acute lymphocytic leukemia protein 2-like.	Core-binding factor subunit beta-like.	0.613
LOC106535057	cbfb	A0A2I4D567	A0A2I4D8S0	T-cell acute lymphocytic leukemia protein 1.	Core-binding factor subunit beta-like.	0.613
cbfb	LOC106512523	A0A2I4D8S0	A0A2I4AM56	Core-binding factor subunit beta-like.	T-cell acute lymphocytic leukemia protein 1-like.	0.613
cbfb	LOC106523991	A0A2I4D8S0	A0A2I4BZ72	Core-binding factor subunit beta-like.	Protein lyl-1-like.	0.722
cbfb	LOC106531136	A0A2I4D8S0	A0A2I4CQV9	Core-binding factor subunit beta-like.	T-cell acute lymphocytic leukemia protein 2-like.	0.613
cbfb	LOC106535057	A0A2I4D8S0	A0A2I4D567	Core-binding factor subunit beta-like.	T-cell acute lymphocytic leukemia protein 1.	0.613
sae1	LOC106515271	A0A2I4D6F0	A0A2I4AY68	SUMO-activating enzyme subunit 1.	Small ubiquitin-related modifier.	0.909