STRINGSTRING
sav1 sav1 LOC106536438 LOC106536438 gata6 gata6 LOC106531892 LOC106531892 ascl1 ascl1 LOC106528125 LOC106528125 prdm1 prdm1 nkx3-2 nkx3-2 epg5 epg5 LOC106518619 LOC106518619 LOC106517965 LOC106517965 med24 med24 gata4 gata4 LOC106514658 LOC106514658 il6st il6st klf5 klf5 LOC106512587 LOC106512587
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sav1Protein salvador homolog 1. (400 aa)
LOC106536438PR domain zinc finger protein 1-like. (697 aa)
gata6Transcription factor GATA-6. (495 aa)
LOC106531892Anterior gradient protein 2 homolog. (164 aa)
ascl1Achaete-scute homolog 1. (193 aa)
LOC106528125Krueppel-like factor 5. (436 aa)
prdm1PR domain zinc finger protein 1 isoform X1. (846 aa)
nkx3-2Homeobox protein Nkx-3.2. (274 aa)
epg5Ectopic P granules protein 5 homolog. (2608 aa)
LOC106518619PR domain zinc finger protein 1-like. (769 aa)
LOC106517965Protein salvador homolog 1-like. (219 aa)
med24Mediator of RNA polymerase II transcription subunit 24 isoform X1. (1023 aa)
gata4Transcription factor GATA-4. (387 aa)
LOC106514658Krueppel-like factor 5. (448 aa)
il6stInterleukin-6 receptor subunit beta isoform X1. (875 aa)
klf5Krueppel-like factor 5 isoform X1. (490 aa)
LOC106512587Transcription factor GATA-5-like. (378 aa)
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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