(30 nodes) Cullin family protein binding network (Austrofundulus limnaeus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	btbd1	BTB/POZ domain-containing protein 1 isoform X1. (490 aa)
	LOC106536759	BTB/POZ domain-containing protein 2-like. (576 aa)
	klhl36	Kelch-like protein 36. (619 aa)
	LOC106535733	DCN1-like protein. (271 aa)
	klhl26	Kelch-like protein 26. (604 aa)
	anapc11	Anaphase-promoting complex subunit 11. (84 aa)
	klhl21	Kelch-like protein 21 isoform X1. (636 aa)
	LOC106533845	DNA translocase FtsK-like. (133 aa)
	atpaf1	ATP synthase mitochondrial F1 complex assembly factor 1. (308 aa)
	LOC106532376	BTB/POZ domain-containing protein KCTD5-like isoform X1. (310 aa)
	LOC106531918	Kelch-like protein 9. (721 aa)
	dcun1d4	DCN1-like protein. (280 aa)
	park2	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (476 aa)
	ccdc22	Coiled-coil domain-containing protein 22 isoform X1. (658 aa)
	LOC106527687	Ankyrin repeat and SOCS box protein 2-like isoform X1. (685 aa)
	LOC106527688	Ankyrin repeat and SOCS box protein 2-like. (633 aa)
	kctd9	BTB/POZ domain-containing protein KCTD9. (389 aa)
	ddb1	DNA damage-binding protein 1. (1140 aa)
	skp1	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
	rnf7	RING-box protein 2. (110 aa)
	LOC106524211	Involucrin-like. (249 aa)
	klhl31	Kelch-like protein 31. (633 aa)
	kctd6	BTB/POZ domain-containing protein KCTD6. (237 aa)
	LOC106521991	BTB/POZ domain-containing protein KCTD5-like. (265 aa)
	LOC106521117	Ankyrin repeat and SOCS box protein 2-like isoform X2. (574 aa)
	LOC106519817	DCN1-like protein. (293 aa)
	LOC106517372	BTB/POZ domain-containing protein KCTD5-like isoform X1. (259 aa)
	klhl13	Kelch-like protein 13 isoform X1. (655 aa)
	dcun1d2	DCN1-like protein. (247 aa)
	klhl34	Kelch-like protein 34. (600 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106517372	LOC106521991	A0A2I4B794	A0A2I4BR74	BTB/POZ domain-containing protein KCTD5-like isoform X1.	BTB/POZ domain-containing protein KCTD5-like.	0.511
LOC106519817	LOC106535733	A0A2I4BH74	A0A2I4D7P0	DCN1-like protein.	DCN1-like protein.	0.514
LOC106519817	LOC106536759	A0A2I4BH74	A0A2I4DBB2	DCN1-like protein.	BTB/POZ domain-containing protein 2-like.	0.472
LOC106519817	btbd1	A0A2I4BH74	A0A2I4CU53	DCN1-like protein.	BTB/POZ domain-containing protein 1 isoform X1.	0.472
LOC106519817	dcun1d4	A0A2I4BH74	A0A2I4CSN3	DCN1-like protein.	DCN1-like protein.	0.508
LOC106519817	ddb1	A0A2I4BH74	A0A2I4C2H0	DCN1-like protein.	DNA damage-binding protein 1.	0.644
LOC106519817	klhl13	A0A2I4BH74	A0A2I4B2U5	DCN1-like protein.	Kelch-like protein 13 isoform X1.	0.407
LOC106519817	klhl21	A0A2I4BH74	A0A2I4D262	DCN1-like protein.	Kelch-like protein 21 isoform X1.	0.554
LOC106519817	klhl34	A0A2I4BH74	A0A2I4AJG5	DCN1-like protein.	Kelch-like protein 34.	0.407
LOC106519817	rnf7	A0A2I4BH74	A0A2I4C0X2	DCN1-like protein.	RING-box protein 2.	0.780
LOC106519817	skp1	A0A2I4BH74	A0A2I4C1J5	DCN1-like protein.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.614
LOC106521117	ccdc22	A0A2I4BMN0	A0A2I4CJN1	Ankyrin repeat and SOCS box protein 2-like isoform X2.	Coiled-coil domain-containing protein 22 isoform X1.	0.435
LOC106521117	rnf7	A0A2I4BMN0	A0A2I4C0X2	Ankyrin repeat and SOCS box protein 2-like isoform X2.	RING-box protein 2.	0.669
LOC106521991	LOC106517372	A0A2I4BR74	A0A2I4B794	BTB/POZ domain-containing protein KCTD5-like.	BTB/POZ domain-containing protein KCTD5-like isoform X1.	0.511
LOC106521991	LOC106532376	A0A2I4BR74	A0A2I4CV50	BTB/POZ domain-containing protein KCTD5-like.	BTB/POZ domain-containing protein KCTD5-like isoform X1.	0.516
LOC106521991	anapc11	A0A2I4BR74	A0A2I4D640	BTB/POZ domain-containing protein KCTD5-like.	Anaphase-promoting complex subunit 11.	0.511
LOC106521991	ddb1	A0A2I4BR74	A0A2I4C2H0	BTB/POZ domain-containing protein KCTD5-like.	DNA damage-binding protein 1.	0.629
LOC106521991	kctd6	A0A2I4BR74	A0A2I4BW05	BTB/POZ domain-containing protein KCTD5-like.	BTB/POZ domain-containing protein KCTD6.	0.417
LOC106521991	park2	A0A2I4BR74	A0A2I4CS57	BTB/POZ domain-containing protein KCTD5-like.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.509
LOC106521991	rnf7	A0A2I4BR74	A0A2I4C0X2	BTB/POZ domain-containing protein KCTD5-like.	RING-box protein 2.	0.703