Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC106510838 | LOC106515268 | A0A2I4AHR1 | A0A2I4AY67 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Trinucleotide repeat-containing gene 6C protein-like isoform X1. | 0.730 |
| LOC106510838 | LOC106530231 | A0A2I4AHR1 | A0A2I4CMQ3 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Trinucleotide repeat-containing gene 6B protein-like. | 0.487 |
| LOC106510838 | LOC106533450 | A0A2I4AHR1 | A0A2I4CYW9 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Trinucleotide repeat-containing gene 6B protein-like. | 0.487 |
| LOC106510838 | LOC106535900 | A0A2I4AHR1 | A0A2I4D8C5 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Trinucleotide repeat-containing gene 6C protein-like isoform X1. | 0.730 |
| LOC106510838 | dicer1 | A0A2I4AHR1 | A0A2I4BHT7 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily. | 0.860 |
| LOC106510838 | tnrc6a | A0A2I4AHR1 | A0A2I4B3P8 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Trinucleotide repeat-containing gene 6A protein. | 0.730 |
| LOC106511070 | cnot1 | A0A2I4AIG2 | A0A2I4CHE5 | Tristetraprolin-like. | CCR4-NOT transcription complex subunit 1. | 0.646 |
| LOC106511070 | dcp1a | A0A2I4AIG2 | A0A2I4ANT4 | Tristetraprolin-like. | mRNA-decapping enzyme 1A. | 0.583 |
| LOC106511070 | dcp1b | A0A2I4AIG2 | A0A2I4AXS3 | Tristetraprolin-like. | mRNA-decapping enzyme 1B. | 0.517 |
| LOC106511070 | dcp2 | A0A2I4AIG2 | A0A2I4ARX1 | Tristetraprolin-like. | m7GpppN-mRNA hydrolase isoform X1. | 0.668 |
| LOC106511070 | dis3l2 | A0A2I4AIG2 | A0A2I4ARZ8 | Tristetraprolin-like. | DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily. | 0.446 |
| LOC106511070 | exosc2 | A0A2I4AIG2 | A0A2I4BUM5 | Tristetraprolin-like. | Exosome complex component RRP4. | 0.566 |
| LOC106511070 | exosc5 | A0A2I4AIG2 | A0A2I4CKT8 | Tristetraprolin-like. | Exosome complex component RRP46. | 0.541 |
| LOC106511070 | exosc8 | A0A2I4AIG2 | A0A2I4ATB2 | Tristetraprolin-like. | Exosome complex component RRP43. | 0.758 |
| LOC106511350 | LOC106511756 | A0A2I4AJ60 | A0A2I4AKF8 | Nuclear pore complex protein Nup98-Nup96-like. | Nuclear pore complex protein Nup98-Nup96-like. | 0.929 |
| LOC106511350 | LOC106511762 | A0A2I4AJ60 | A0A2I4AKB3 | Nuclear pore complex protein Nup98-Nup96-like. | Nuclear pore complex protein Nup98-Nup96-like. | 0.714 |
| LOC106511350 | LOC106532103 | A0A2I4AJ60 | A0A2I4CU87 | Nuclear pore complex protein Nup98-Nup96-like. | Nuclear pore complex protein Nup98-Nup96-like. | 0.901 |
| LOC106511359 | LOC106511698 | A0A2I4AJB4 | A0A2I4AK92 | Nocturnin-like. | CCR4-NOT transcription complex subunit 2-like. | 0.727 |
| LOC106511359 | LOC106521380 | A0A2I4AJB4 | A0A2I4BNQ0 | Nocturnin-like. | Protein PAT1 homolog 2-like. | 0.567 |
| LOC106511359 | LOC106528860 | A0A2I4AJB4 | A0A2I4CHW5 | Nocturnin-like. | CCR4-NOT transcription complex subunit 7. | 0.764 |
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