STRINGSTRING
LOC106515824 LOC106515824 LOC106517771 LOC106517771 dhx36 dhx36 pwp1 pwp1 sirt6 sirt6 LOC106526526 LOC106526526 LOC106530581 LOC106530581 sox6 sox6 LOC106530886 LOC106530886 LOC106535673 LOC106535673 nudt21 nudt21 supt5h supt5h sox5 sox5 LOC106515813 LOC106515813
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106515824Transforming growth factor beta; Belongs to the TGF-beta family. (421 aa)
LOC106517771RNA-binding protein 24-like. (120 aa)
dhx36ATP-dependent RNA helicase DHX36. (1071 aa)
pwp1Periodic tryptophan protein 1 homolog. (491 aa)
sirt6NAD-dependent protein deacetylase sirtuin-6. (349 aa)
LOC106526526Tumor-associated calcium signal transducer 2-like. (308 aa)
LOC106530581Transcription factor SOX-5-like isoform X1. (353 aa)
sox6Transcription factor SOX-6 isoform X1. (287 aa)
LOC106530886Transcription factor SOX-6-like isoform X1. (776 aa)
LOC106535673Transcription factor SOX-6-like. (779 aa)
nudt21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (234 aa)
supt5hTranscription elongation factor SPT5. (1080 aa)
sox5Transcription factor SOX-5. (787 aa)
LOC106515813RNA-binding protein 24. (232 aa)
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.