STRINGSTRING
rnf111 rnf111 LOC106532432 LOC106532432 LOC106532717 LOC106532717 LOC106533213 LOC106533213 rnf4 rnf4 LOC106534711 LOC106534711 chek2 chek2 LOC106515271 LOC106515271 tdp2 tdp2 LOC106515960 LOC106515960 klhl20 klhl20 ppargc1a ppargc1a zbtb16 zbtb16 blm blm LOC106514118 LOC106514118 LOC106513467 LOC106513467 rnf6 rnf6 LOC106512757 LOC106512757 LOC106512628 LOC106512628 LOC106511400 LOC106511400 ciita ciita LOC106516655 LOC106516655 LOC106516745 LOC106516745 LOC106516744 LOC106516744 hsf2 hsf2 LOC106518458 LOC106518458 daxx daxx calcoco2 calcoco2 sumo2 sumo2 mlip mlip LOC106523318 LOC106523318 LOC106523505 LOC106523505 tp53inp2 tp53inp2 chfr chfr tp53inp1 tp53inp1 nagpa nagpa ankrd1 ankrd1 rpain rpain trim8 trim8 LOC106527012 LOC106527012 LOC106527075 LOC106527075 LOC106527522 LOC106527522 casp8ap2 casp8ap2 rdm1 rdm1 pten pten morc3 morc3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rnf111LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase Arkadia. (1015 aa)
LOC106532432Heat shock factor protein 1-like. (441 aa)
LOC1065327174-hydroxy-2-oxoglutarate aldolase, mitochondrial-like. (75 aa)
LOC106533213Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (601 aa)
rnf4E3 ubiquitin-protein ligase RNF4 isoform X1. (229 aa)
LOC106534711NEDD4-binding protein 1-like. (274 aa)
chek2Serine/threonine-protein kinase Chk2. (537 aa)
LOC106515271Small ubiquitin-related modifier. (96 aa)
tdp2tyrosyl-DNA phosphodiesterase 2 isoform X1. (360 aa)
LOC106515960Acidic repeat-containing protein-like. (570 aa)
klhl20Kelch-like protein 20. (604 aa)
ppargc1aPeroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1. (1002 aa)
zbtb16Zinc finger and BTB domain-containing protein 16 isoform X2. (658 aa)
blmBloom syndrome protein isoform X1. (1417 aa)
LOC106514118Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2-like isoform X1. (511 aa)
LOC106513467Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family. (443 aa)
rnf6E3 ubiquitin-protein ligase RNF6. (721 aa)
LOC106512757Uncharacterized protein F13E9.13, mitochondrial-like. (124 aa)
LOC106512628NEDD4-binding protein 1-like. (137 aa)
LOC106511400NEDD4-binding protein 1-like. (838 aa)
ciitaMHC class II transactivator. (1514 aa)
LOC106516655Probable E3 ubiquitin-protein ligase TRIM8. (588 aa)
LOC106516745Tumor protein p53-inducible nuclear protein 2-like. (165 aa)
LOC106516744Uncharacterized protein F13E9.13, mitochondrial-like. (268 aa)
hsf2Heat shock factor protein 2. (567 aa)
LOC106518458Small ubiquitin-related modifier. (94 aa)
daxxDeath domain-associated protein 6. (746 aa)
calcoco2Calcium-binding and coiled-coil domain-containing protein 2. (596 aa)
sumo2Small ubiquitin-related modifier. (95 aa)
mlipMuscular LMNA-interacting protein isoform X1. (826 aa)
LOC106523318Small ubiquitin-related modifier. (94 aa)
LOC106523505Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (665 aa)
tp53inp2Tumor protein p53-inducible nuclear protein 2 isoform X1. (314 aa)
chfrE3 ubiquitin-protein ligase CHFR. (645 aa)
tp53inp1Tumor protein p53-inducible nuclear protein 1. (289 aa)
nagpaN-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. (596 aa)
ankrd1Ankyrin repeat domain-containing protein 1. (312 aa)
rpainRPA-interacting protein. (229 aa)
trim8Probable E3 ubiquitin-protein ligase TRIM8. (563 aa)
LOC106527012tyrosyl-DNA phosphodiesterase 2-like. (298 aa)
LOC106527075NEDD4-binding protein 1-like. (1002 aa)
LOC106527522Heat shock factor protein-like isoform X1. (544 aa)
casp8ap2CASP8-associated protein 2. (1772 aa)
rdm1RAD52 motif-containing protein 1 isoform X1. (296 aa)
ptenPhosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family. (411 aa)
morc3MORC family CW-type zinc finger protein 3 isoform X1. (1018 aa)
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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