(47 nodes) Midbody network (Austrofundulus limnaeus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sccpdh	Saccharopine dehydrogenase-like oxidoreductase. (427 aa)
	cenpf	Centromere protein F isoform X1. (2749 aa)
	LOC106513960	Baculoviral IAP repeat-containing protein 6-like. (3231 aa)
	LOC106513950	Baculoviral IAP repeat-containing protein 6-like. (218 aa)
	LOC106514301	Putative ATP-dependent RNA helicase DDX11-like protein 8 isoform X1. (906 aa)
	LOC106515759	Centromere protein F-like isoform X1. (1572 aa)
	pdcd6ip	Programmed cell death 6-interacting protein isoform X1. (875 aa)
	spast	Spastin isoform X1; Belongs to the AAA ATPase family. (472 aa)
	LOC106516089	Guanine nucleotide-binding protein G(I) subunit alpha-2-like. (248 aa)
	cep55	Centrosomal protein of 55 kDa. (507 aa)
	tbck	TBC domain-containing protein kinase-like protein. (887 aa)
	ankrd54	Ankyrin repeat domain-containing protein 54. (312 aa)
	LOC106517997	Guanine nucleotide-binding protein G(I) subunit alpha-2. (402 aa)
	ypel5	Protein yippee-like; Belongs to the yippee family. (121 aa)
	LOC106518576	ADP-ribosylation factor 6-like; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	LOC106518575	E3 ubiquitin-protein ligase pellino homolog 2-like. (428 aa)
	kif14	Kinesin-like protein KIF14 isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1606 aa)
	LOC106519316	Cell division control protein 42 homolog isoform X1. (191 aa)
	LOC106519594	Cell division control protein 42 homolog. (191 aa)
	mitd1	MIT domain-containing protein 1. (249 aa)
	ttc28	Tetratricopeptide repeat protein 28 isoform X1. (2469 aa)
	LOC106520909	E3 ubiquitin-protein ligase pellino homolog 2. (424 aa)
	LOC106520967	ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	LOC106521531	Spartin-like isoform X1. (588 aa)
	exoc7	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (689 aa)
	sirt2	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase. (383 aa)
	LOC106522649	Baculoviral IAP repeat-containing protein 5.1-A-like isoform X1. (147 aa)
	LOC106522856	Bombesin receptor-activated protein C6orf89 homolog. (332 aa)
	kif4a	Chromosome-associated kinesin KIF4A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1230 aa)
	LOC106525690	Protein yippee-like; Belongs to the yippee family. (120 aa)
	LOC106525792	Microtubule cross-linking factor 1-like. (253 aa)
	zfyve21	Zinc finger FYVE domain-containing protein 21. (188 aa)
	ssna1	Sjoegren syndrome nuclear autoantigen 1. (114 aa)
	LOC106528512	Cell division control protein 42 homolog isoform X1. (191 aa)
	LOC106528792	Baculoviral IAP repeat-containing protein 5.2-like. (142 aa)
	LOC106529148	Cell division control protein 42 homolog. (191 aa)
	ist1	IST1 homolog isoform X1. (348 aa)
	hepacam2	HEPACAM family member 2. (457 aa)
	zfyve26	Zinc finger FYVE domain-containing protein 26. (2580 aa)
	agbl5	Cytosolic carboxypeptidase-like protein 5 isoform X1. (912 aa)
	LOC106534961	Guanine nucleotide-binding protein G(I) subunit alpha-1. (354 aa)
	LOC106535036	Baculoviral IAP repeat-containing protein 6-like isoform X1. (5009 aa)
	lzts2	Leucine zipper putative tumor suppressor 2 homolog; Negative regulator of katanin-mediated microtubule severing and release from the centrosome. Required for central spindle formation and the completion of cytokinesis. Negative regulator of the Wnt signaling pathway. Represses beta-catenin-mediated transcriptional activation by promoting the nuclear exclusion of beta-catenin. Belongs to the LZTS2 family. (695 aa)
	LOC106535554	Guanine nucleotide-binding protein G(I) subunit alpha-1. (354 aa)
	LOC106535577	Microtubule cross-linking factor 1-like. (1738 aa)
	nudc	Nuclear migration protein nudC isoform X1. (331 aa)
	LOC106537084	Pro-interleukin-16-like. (1355 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106513950	LOC106513960	A0A2I4ASL8	A0A2I4ASL4	Baculoviral IAP repeat-containing protein 6-like.	Baculoviral IAP repeat-containing protein 6-like.	0.978
LOC106513950	LOC106535036	A0A2I4ASL8	A0A2I4D669	Baculoviral IAP repeat-containing protein 6-like.	Baculoviral IAP repeat-containing protein 6-like isoform X1.	0.680
LOC106513960	LOC106513950	A0A2I4ASL4	A0A2I4ASL8	Baculoviral IAP repeat-containing protein 6-like.	Baculoviral IAP repeat-containing protein 6-like.	0.978
LOC106513960	LOC106535036	A0A2I4ASL4	A0A2I4D669	Baculoviral IAP repeat-containing protein 6-like.	Baculoviral IAP repeat-containing protein 6-like isoform X1.	0.680
LOC106515759	LOC106522649	A0A2I4B093	A0A2I4BTV9	Centromere protein F-like isoform X1.	Baculoviral IAP repeat-containing protein 5.1-A-like isoform X1.	0.654
LOC106515759	LOC106528792	A0A2I4B093	A0A2I4CHN3	Centromere protein F-like isoform X1.	Baculoviral IAP repeat-containing protein 5.2-like.	0.728
LOC106515759	cep55	A0A2I4B093	A0A2I4B5M9	Centromere protein F-like isoform X1.	Centrosomal protein of 55 kDa.	0.760
LOC106515759	kif14	A0A2I4B093	A0A2I4BEP2	Centromere protein F-like isoform X1.	Kinesin-like protein KIF14 isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.742
LOC106515759	kif4a	A0A2I4B093	A0A2I4BVY2	Centromere protein F-like isoform X1.	Chromosome-associated kinesin KIF4A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.623
LOC106515759	nudc	A0A2I4B093	A0A2I4D848	Centromere protein F-like isoform X1.	Nuclear migration protein nudC isoform X1.	0.640
LOC106518576	LOC106520967	A0A2I4BC99	A0A2I4BLY9	ADP-ribosylation factor 6-like; Belongs to the small GTPase superfamily. Arf family.	ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	0.900
LOC106518576	exoc7	A0A2I4BC99	A0A2I4BRE2	ADP-ribosylation factor 6-like; Belongs to the small GTPase superfamily. Arf family.	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.600
LOC106519316	exoc7	A0A2I4BF52	A0A2I4BRE2	Cell division control protein 42 homolog isoform X1.	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.682
LOC106519594	exoc7	A0A2I4BGB5	A0A2I4BRE2	Cell division control protein 42 homolog.	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.612
LOC106520967	LOC106518576	A0A2I4BLY9	A0A2I4BC99	ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	ADP-ribosylation factor 6-like; Belongs to the small GTPase superfamily. Arf family.	0.900
LOC106520967	exoc7	A0A2I4BLY9	A0A2I4BRE2	ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.600
LOC106521531	ist1	A0A2I4BPD1	A0A2I4CN52	Spartin-like isoform X1.	IST1 homolog isoform X1.	0.873
LOC106521531	mitd1	A0A2I4BPD1	A0A2I4BHB3	Spartin-like isoform X1.	MIT domain-containing protein 1.	0.408
LOC106521531	zfyve26	A0A2I4BPD1	A0A2I4CYF9	Spartin-like isoform X1.	Zinc finger FYVE domain-containing protein 26.	0.407
LOC106522649	LOC106515759	A0A2I4BTV9	A0A2I4B093	Baculoviral IAP repeat-containing protein 5.1-A-like isoform X1.	Centromere protein F-like isoform X1.	0.654