STRINGSTRING
LOC106536939 LOC106536939 kcnv1 kcnv1 LOC106537310 LOC106537310 unc119 unc119 rbm18 rbm18 trim45 trim45 ninl ninl LOC106526394 LOC106526394 LOC106527773 LOC106527773 LOC106522472 LOC106522472 rab35 rab35 LOC106520571 LOC106520571 cd34 cd34 nudcd2 nudcd2 klhdc8b klhdc8b LOC106523461 LOC106523461 LOC106534652 LOC106534652 usb1 usb1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106536939Ras-related protein Rab-35-like. (207 aa)
kcnv1Potassium voltage-gated channel subfamily V member 1 isoform X2; Belongs to the potassium channel family. (395 aa)
LOC106537310Cytohesin-4-like. (204 aa)
unc119Protein unc-119 homolog A isoform X1. (205 aa)
rbm18Probable RNA-binding protein 18. (201 aa)
trim45Tripartite motif-containing protein 45. (576 aa)
ninlNinein-like protein. (1596 aa)
LOC106526394Protein unc-119 homolog A-like. (257 aa)
LOC106527773Uncharacterized protein LOC106527773. (284 aa)
LOC106522472Cytohesin-1-like. (202 aa)
rab35Ras-related protein Rab-35 isoform X1. (201 aa)
LOC106520571Microtubule-associated tumor suppressor candidate 2-like. (1133 aa)
cd34Hematopoietic progenitor cell antigen CD34 isoform X1. (337 aa)
nudcd2nudC domain-containing protein 2. (157 aa)
klhdc8bKelch domain-containing protein 8B. (359 aa)
LOC106523461Protein unc-119 homolog A-like. (206 aa)
LOC106534652Microtubule-associated tumor suppressor candidate 2-like isoform X1. (1425 aa)
usb1U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family. (288 aa)
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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