(8 nodes) Sperm principal piece network (Austrofundulus limnaeus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106523331	Thioredoxin domain-containing protein 6-like; Belongs to the NDK family. (620 aa)
	efcab2	EF-hand calcium-binding domain-containing protein 2. (161 aa)
	spag6	Sperm-associated antigen 6. (507 aa)
	slc9b2	Mitochondrial sodium/hydrogen exchanger 9B2. (566 aa)
	LOC106518959	C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family. (383 aa)
	LOC106533239	C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family. (359 aa)
	ccr6	C-C chemokine receptor type 6; Belongs to the G-protein coupled receptor 1 family. (388 aa)
	LOC106536946	LOW QUALITY PROTEIN: mitochondrial sodium/hydrogen exchanger 9B2-like. (485 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106518959	LOC106533239	A0A2I4BDP9	A0A2I4CY56	C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family.	C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family.	0.901
LOC106518959	ccr6	A0A2I4BDP9	A0A2I4CZN3	C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family.	C-C chemokine receptor type 6; Belongs to the G-protein coupled receptor 1 family.	0.901
LOC106523331	efcab2	A0A2I4BWQ0	A0A2I4AP80	Thioredoxin domain-containing protein 6-like; Belongs to the NDK family.	EF-hand calcium-binding domain-containing protein 2.	0.453
LOC106533239	LOC106518959	A0A2I4CY56	A0A2I4BDP9	C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family.	C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family.	0.901
LOC106533239	ccr6	A0A2I4CY56	A0A2I4CZN3	C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family.	C-C chemokine receptor type 6; Belongs to the G-protein coupled receptor 1 family.	0.901
ccr6	LOC106518959	A0A2I4CZN3	A0A2I4BDP9	C-C chemokine receptor type 6; Belongs to the G-protein coupled receptor 1 family.	C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family.	0.901
ccr6	LOC106533239	A0A2I4CZN3	A0A2I4CY56	C-C chemokine receptor type 6; Belongs to the G-protein coupled receptor 1 family.	C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family.	0.901
efcab2	LOC106523331	A0A2I4AP80	A0A2I4BWQ0	EF-hand calcium-binding domain-containing protein 2.	Thioredoxin domain-containing protein 6-like; Belongs to the NDK family.	0.453