STRINGSTRING
LOC106516049 LOC106516049 sf3a1 sf3a1 iqub iqub LOC106517640 LOC106517640 LOC106517805 LOC106517805 yod1 yod1 LOC106518458 LOC106518458 fau fau LOC106518873 LOC106518873 uhrf1 uhrf1 uba52 uba52 herpud2 herpud2 LOC106521413 LOC106521413 LOC106521694 LOC106521694 sumo2 sumo2 sacs sacs uhrf2 uhrf2 ubtd2 ubtd2 LOC106523318 LOC106523318 ublcp1 ublcp1 bag1 bag1 LOC106524961 LOC106524961 ubb ubb LOC106535939 LOC106535939 nfatc2ip nfatc2ip ubl3 ubl3 tmub1 tmub1 usp48 usp48 usp14 usp14 faf1 faf1 park2 park2 sumo1 sumo1 ubtd1 ubtd1 bag6 bag6 LOC106529525 LOC106529525 zfand4 zfand4 snrnp25 snrnp25 ubac1 ubac1 LOC106528640 LOC106528640 ubfd1 ubfd1 ubl7 ubl7 tbcb tbcb LOC106527352 LOC106527352 midn midn ubqln1 ubqln1 ubl5 ubl5 LOC106536995 LOC106536995 tbce tbce ikbkb ikbkb herpud1 herpud1 rps27a rps27a LOC106512508 LOC106512508 LOC106513356 LOC106513356 LOC106514957 LOC106514957 LOC106514996 LOC106514996 LOC106515271 LOC106515271 LOC106515624 LOC106515624 ubqln4 ubqln4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106516049Protein DDI1 homolog 2-like isoform X1. (791 aa)
sf3a1Splicing factor 3A subunit 1. (809 aa)
iqubIQ and ubiquitin-like domain-containing protein. (703 aa)
LOC106517640ranBP-type and C3HC4-type zinc finger-containing protein 1-like. (520 aa)
LOC106517805UV excision repair protein RAD23 homolog A-like. (365 aa)
yod1Ubiquitin thioesterase OTU1. (300 aa)
LOC106518458Small ubiquitin-related modifier. (94 aa)
fau40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
LOC106518873Ubiquitin-like. (76 aa)
uhrf1E3 ubiquitin-protein ligase UHRF1. (774 aa)
uba52ubiquitin-60S ribosomal protein L40. (128 aa)
herpud2annotation not available (382 aa)
LOC106521413Transcription elongation factor B polypeptide 2. (119 aa)
LOC106521694polyubiquitin-B-like. (154 aa)
sumo2Small ubiquitin-related modifier. (95 aa)
sacsSacsin isoform X1. (4588 aa)
uhrf2E3 ubiquitin-protein ligase UHRF2 isoform X1. (941 aa)
ubtd2Ubiquitin domain-containing protein 2. (270 aa)
LOC106523318Small ubiquitin-related modifier. (94 aa)
ublcp1Ubiquitin-like domain-containing CTD phosphatase 1. (318 aa)
bag1BAG family molecular chaperone regulator 1. (208 aa)
LOC106524961Ubiquitin domain-containing protein 1-like isoform X1. (255 aa)
ubbpolyubiquitin-B. (153 aa)
LOC106535939UV excision repair protein RAD23 homolog B-like. (381 aa)
nfatc2ipNFATC2-interacting protein. (327 aa)
ubl3Ubiquitin-like protein. (117 aa)
tmub1Transmembrane and ubiquitin-like domain-containing protein 1. (144 aa)
usp48Ubiquitin carboxyl-terminal hydrolase 48 isoform X1; Belongs to the peptidase C19 family. (1038 aa)
usp14Ubiquitin carboxyl-terminal hydrolase. (491 aa)
faf1FAS-associated factor 1. (674 aa)
park2E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (476 aa)
sumo1Small ubiquitin-related modifier. (101 aa)
ubtd1Ubiquitin domain-containing protein 1. (245 aa)
bag6Large proline-rich protein BAG6 isoform X1. (1202 aa)
LOC106529525Transcription elongation factor B polypeptide 2-like. (119 aa)
zfand4AN1-type zinc finger protein 4. (730 aa)
snrnp25U11/U12 small nuclear ribonucleoprotein 25 kDa protein. (186 aa)
ubac1Ubiquitin-associated domain-containing protein 1 isoform X1. (423 aa)
LOC106528640Ubiquitin-like protein 4A. (153 aa)
ubfd1Ubiquitin domain-containing protein UBFD1. (298 aa)
ubl7Ubiquitin-like protein 7. (379 aa)
tbcbTubulin-folding cofactor B. (245 aa)
LOC106527352Ankyrin repeat and SOCS box protein 16-like isoform X1. (792 aa)
midnMidnolin. (398 aa)
ubqln1Ubiquilin-1. (527 aa)
ubl5Ubiquitin-like protein 5. (73 aa)
LOC106536995NEDD8. (89 aa)
tbceTubulin-specific chaperone E. (545 aa)
ikbkbInhibitor of nuclear factor kappa-B kinase subunit beta. (742 aa)
herpud1Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein. (411 aa)
rps27aubiquitin-40S ribosomal protein S27a. (156 aa)
LOC106512508polyubiquitin-B-like. (146 aa)
LOC106513356Ubiquitin-like. (85 aa)
LOC106514957NEDD8-like. (90 aa)
LOC106514996Midnolin-like isoform X1. (581 aa)
LOC106515271Small ubiquitin-related modifier. (96 aa)
LOC106515624Ubiquitin-like protein. (117 aa)
ubqln4Ubiquilin-4. (587 aa)
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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