(40 nodes) Bromodomain, conserved site network (Austrofundulus limnaeus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106535813	Bromodomain adjacent to zinc finger domain protein 2B-like isoform X1. (2030 aa)
	LOC106510828	Bromodomain adjacent to zinc finger domain protein 1A-like. (738 aa)
	LOC106511457	CREB-binding protein-like. (2055 aa)
	brd3	Bromodomain-containing protein 3. (500 aa)
	LOC106515246	Transcription activator BRG1-like isoform X2. (1667 aa)
	kat2b	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (792 aa)
	LOC106516196	Bromodomain and PHD finger-containing protein 3-like isoform X1. (1240 aa)
	brwd3	Bromodomain and WD repeat-containing protein 3. (1773 aa)
	baz2a	Bromodomain adjacent to zinc finger domain protein 2A. (2660 aa)
	smarca4	Transcription activator BRG1. (1611 aa)
	LOC106517976	Protein polybromo-1-like. (1579 aa)
	LOC106518707	CREB-binding protein-like. (2423 aa)
	LOC106518910	Bromodomain and PHD finger-containing protein 3-like. (1241 aa)
	brd2	Bromodomain-containing protein 2. (822 aa)
	ep300	Histone acetyltransferase p300. (2746 aa)
	LOC106520872	Histone-lysine N-methyltransferase ASH1L-like isoform X1. (2937 aa)
	brd1	Bromodomain-containing protein 1. (1239 aa)
	brpf1	Peregrin isoform X1. (1307 aa)
	LOC106522696	Bromodomain-containing protein 4-like. (1433 aa)
	LOC106523079	Bromodomain-containing protein 2-like. (832 aa)
	LOC106523872	Nucleosome-remodeling factor subunit BPTF-like isoform X1. (3278 aa)
	LOC106524470	Histone acetyltransferase p300-like. (1450 aa)
	atad2b	ATPase family AAA domain-containing protein 2B. (1458 aa)
	LOC106527830	Bromodomain-containing protein 3-like. (670 aa)
	kat2a	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (797 aa)
	bptf	Nucleosome-remodeling factor subunit BPTF. (2931 aa)
	LOC106528693	ATPase family AAA domain-containing protein 2-like. (1268 aa)
	LOC106529285	Bromodomain-containing protein 4-like isoform X1. (1520 aa)
	LOC106529631	Bromodomain-containing protein 3-like isoform X2. (995 aa)
	LOC106531992	Transcription initiation factor TFIID subunit. (1946 aa)
	LOC106532533	CREB-binding protein-like. (1978 aa)
	baz2b	Bromodomain adjacent to zinc finger domain protein 2B isoform X1. (2373 aa)
	LOC106534067	Protein polybromo-1-like isoform X1. (1520 aa)
	LOC106534768	Probable global transcription activator SNF2L2 isoform X1. (278 aa)
	phip	PH-interacting protein. (1836 aa)
	trim33	E3 ubiquitin-protein ligase TRIM33 isoform X1. (1190 aa)
	LOC106536015	Probable global transcription activator SNF2L2. (1606 aa)
	baz1b	Tyrosine-protein kinase BAZ1B isoform X1. (1586 aa)
	LOC106536817	Protein polybromo-1-like. (1631 aa)
	cecr2	Cat eye syndrome critical region protein 2. (1623 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106510828	cecr2	A0A2I4AHQ0	A0A2I4DCD2	Bromodomain adjacent to zinc finger domain protein 1A-like.	Cat eye syndrome critical region protein 2.	0.458
LOC106510828	kat2a	A0A2I4AHQ0	A0A2I4CEX4	Bromodomain adjacent to zinc finger domain protein 1A-like.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.506
LOC106510828	kat2b	A0A2I4AHQ0	A0A2I4B0H2	Bromodomain adjacent to zinc finger domain protein 1A-like.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.506
LOC106511457	LOC106524470	A0A2I4AJK8	A0A2I4C1A2	CREB-binding protein-like.	Histone acetyltransferase p300-like.	0.821
LOC106511457	baz1b	A0A2I4AJK8	A0A2I4DAI2	CREB-binding protein-like.	Tyrosine-protein kinase BAZ1B isoform X1.	0.423
LOC106511457	cecr2	A0A2I4AJK8	A0A2I4DCD2	CREB-binding protein-like.	Cat eye syndrome critical region protein 2.	0.574
LOC106511457	ep300	A0A2I4AJK8	A0A2I4BKM8	CREB-binding protein-like.	Histone acetyltransferase p300.	0.818
LOC106511457	kat2a	A0A2I4AJK8	A0A2I4CEX4	CREB-binding protein-like.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.681
LOC106511457	kat2b	A0A2I4AJK8	A0A2I4B0H2	CREB-binding protein-like.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.681
LOC106515246	LOC106517976	A0A2I4AY30	A0A2I4B9S8	Transcription activator BRG1-like isoform X2.	Protein polybromo-1-like.	0.821
LOC106515246	LOC106534067	A0A2I4AY30	A0A2I4D1B5	Transcription activator BRG1-like isoform X2.	Protein polybromo-1-like isoform X1.	0.821
LOC106515246	LOC106536817	A0A2I4AY30	A0A2I4DBI8	Transcription activator BRG1-like isoform X2.	Protein polybromo-1-like.	0.821
LOC106515246	brwd3	A0A2I4AY30	A0A2I4B380	Transcription activator BRG1-like isoform X2.	Bromodomain and WD repeat-containing protein 3.	0.471
LOC106515246	kat2a	A0A2I4AY30	A0A2I4CEX4	Transcription activator BRG1-like isoform X2.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.614
LOC106515246	kat2b	A0A2I4AY30	A0A2I4B0H2	Transcription activator BRG1-like isoform X2.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.614
LOC106515246	phip	A0A2I4AY30	A0A2I4D7L4	Transcription activator BRG1-like isoform X2.	PH-interacting protein.	0.471
LOC106516196	brd1	A0A2I4B296	A0A2I4BQG9	Bromodomain and PHD finger-containing protein 3-like isoform X1.	Bromodomain-containing protein 1.	0.551
LOC106516196	brpf1	A0A2I4B296	A0A2I4BU12	Bromodomain and PHD finger-containing protein 3-like isoform X1.	Peregrin isoform X1.	0.550
LOC106517976	LOC106515246	A0A2I4B9S8	A0A2I4AY30	Protein polybromo-1-like.	Transcription activator BRG1-like isoform X2.	0.821
LOC106517976	LOC106534768	A0A2I4B9S8	A0A2I4D3Z5	Protein polybromo-1-like.	Probable global transcription activator SNF2L2 isoform X1.	0.602