62 items (Austrofundulus limnaeus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106519090	piggyBac transposable element-derived protein 4-like. (528 aa)
	LOC106519284	CMRF35-like molecule 3 isoform X1. (187 aa)
	LOC106519432	Sialic acid-binding Ig-like lectin 14. (193 aa)
	LOC106519573	LOW QUALITY PROTEIN: BOLA class I histocompatibility antigen, alpha chain BL3-7-like; Belongs to the MHC class I family. (302 aa)
	clec4e	C-type lectin domain family 4 member E isoform X2. (238 aa)
	itgb1	Integrin beta; Belongs to the integrin beta chain family. (800 aa)
	LOC106521072	T-cell surface glycoprotein CD3 delta chain-like. (174 aa)
	LOC106521424	Polymeric immunoglobulin receptor-like. (238 aa)
	LOC106522312	Tumor necrosis factor ligand superfamily member 10-like; Belongs to the tumor necrosis factor family. (198 aa)
	LOC106522217	Uncharacterized protein LOC106522217. (224 aa)
	LOC106522907	Integrin beta; Belongs to the integrin beta chain family. (792 aa)
	celf4	CUGBP Elav-like family member 4 isoform X1. (266 aa)
	cd8a	T-cell surface glycoprotein CD8 alpha chain isoform X1. (219 aa)
	LOC106523702	CD48 antigen-like. (252 aa)
	scn2b	Sodium channel subunit beta-2. (221 aa)
	vcam1	Vascular cell adhesion protein 1. (811 aa)
	tnfsf10	Tumor necrosis factor ligand superfamily member 10 isoform X1; Belongs to the tumor necrosis factor family. (288 aa)
	LOC106526910	Integrin alpha-M-like; Belongs to the integrin alpha chain family. (1201 aa)
	LOC106527245	SH2 domain-containing protein 1A-like. (146 aa)
	crtam	Cytotoxic and regulatory T-cell molecule. (462 aa)
	LOC106515333	Uncharacterized protein LOC106515333. (633 aa)
	LOC106515087	CUGBP Elav-like family member 3 isoform X1. (483 aa)
	celf5	CUGBP Elav-like family member 5 isoform X1. (528 aa)
	LOC106514970	T-cell surface glycoprotein CD3 epsilon chain-like. (177 aa)
	LOC106514964	T-cell surface glycoprotein CD3 epsilon chain-like. (168 aa)
	LOC106514946	CMRF35-like molecule 5. (338 aa)
	LOC106514574	Neural proliferation differentiation and control protein 1-like. (332 aa)
	cd226	CD226 antigen isoform X1. (357 aa)
	igll5	Immunoglobulin lambda-like polypeptide 5. (106 aa)
	LOC106512352	piggyBac transposable element-derived protein 3-like. (233 aa)
	LOC106517451	piggyBac transposable element-derived protein 4-like. (677 aa)
	LOC106512145	Sialic acid-binding Ig-like lectin 5. (189 aa)
	LOC106527592	OX-2 membrane glycoprotein-like. (322 aa)
	LOC106527773	Uncharacterized protein LOC106527773. (284 aa)
	npdc1	Neural proliferation differentiation and control protein 1. (305 aa)
	LOC106530048	B-cell receptor CD22-like. (843 aa)
	LOC106530054	Basement membrane-specific heparan sulfate proteoglycan core protein-like. (795 aa)
	LOC106530047	Myeloid cell surface antigen CD33-like. (302 aa)
	LOC106530046	Sialic acid-binding Ig-like lectin 5. (190 aa)
	LOC106530083	Uncharacterized protein LOC106530083. (209 aa)
	LOC106530311	Coxsackievirus and adenovirus receptor homolog. (375 aa)
	LOC106530383	Uncharacterized protein LOC106530383. (263 aa)
	LOC106530485	Integrin beta. (776 aa)
	LOC106531849	SH2 domain-containing protein 1B-like. (197 aa)
	LOC106531908	CMRF35-like molecule 1. (377 aa)
	LOC106531985	Tumor necrosis factor receptor superfamily member 5-like. (305 aa)
	LOC106532315	Conglutinin-like. (315 aa)
	cxadr	Coxsackievirus and adenovirus receptor. (148 aa)
	LOC106534382	Tumor necrosis factor ligand superfamily member 10-like; Belongs to the tumor necrosis factor family. (192 aa)
	LOC106534985	CUGBP Elav-like family member 4. (484 aa)
	LOC106535005	CUGBP Elav-like family member 3-B isoform X1. (492 aa)
	LOC106535616	CD99 antigen-like isoform X1. (189 aa)
	LOC106536019	CUGBP Elav-like family member 3. (458 aa)
	LOC106511186	Tumor necrosis factor ligand superfamily member 11-like; Belongs to the tumor necrosis factor family. (263 aa)
	LOC106512135	LOW QUALITY PROTEIN: uncharacterized protein LOC106512135. (287 aa)
	LOC106537298	Neural proliferation differentiation and control protein 1-like. (167 aa)
	LOC106517590	T-cell surface glycoprotein CD3 zeta chain-like. (147 aa)
	LOC106517680	B-cell receptor CD22-like. (258 aa)
	LOC106517690	Myelin-associated glycoprotein-like. (146 aa)
	LOC106517689	Myelin-associated glycoprotein-like. (381 aa)
	LOC106517679	Myeloid cell surface antigen CD33-like. (401 aa)
	cd34	Hematopoietic progenitor cell antigen CD34 isoform X1. (337 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106511186	LOC106531985	A0A2I4AIS2	A0A2I4CTT3	Tumor necrosis factor ligand superfamily member 11-like; Belongs to the tumor necrosis factor family.	Tumor necrosis factor receptor superfamily member 5-like.	0.812
LOC106512352	LOC106514964	A0A2I4ALS6	A0A2I4AWV5	piggyBac transposable element-derived protein 3-like.	T-cell surface glycoprotein CD3 epsilon chain-like.	0.908
LOC106512352	LOC106514970	A0A2I4ALS6	A0A2I4AWW0	piggyBac transposable element-derived protein 3-like.	T-cell surface glycoprotein CD3 epsilon chain-like.	0.908
LOC106512352	LOC106517590	A0A2I4ALS6	A0A2I4B8A0	piggyBac transposable element-derived protein 3-like.	T-cell surface glycoprotein CD3 zeta chain-like.	0.902
LOC106512352	LOC106527245	A0A2I4ALS6	A0A2I4CC21	piggyBac transposable element-derived protein 3-like.	SH2 domain-containing protein 1A-like.	0.442
LOC106512352	cd8a	A0A2I4ALS6	A0A2I4BXT1	piggyBac transposable element-derived protein 3-like.	T-cell surface glycoprotein CD8 alpha chain isoform X1.	0.749
LOC106514946	LOC106515333	A0A2I4AWT4	A0A2I4AYE5	CMRF35-like molecule 5.	Uncharacterized protein LOC106515333.	0.900
LOC106514964	LOC106512352	A0A2I4AWV5	A0A2I4ALS6	T-cell surface glycoprotein CD3 epsilon chain-like.	piggyBac transposable element-derived protein 3-like.	0.908
LOC106514964	LOC106517451	A0A2I4AWV5	A0A2I4B7P3	T-cell surface glycoprotein CD3 epsilon chain-like.	piggyBac transposable element-derived protein 4-like.	0.953
LOC106514964	LOC106517590	A0A2I4AWV5	A0A2I4B8A0	T-cell surface glycoprotein CD3 epsilon chain-like.	T-cell surface glycoprotein CD3 zeta chain-like.	0.979
LOC106514964	LOC106519090	A0A2I4AWV5	A0A2I4BEA7	T-cell surface glycoprotein CD3 epsilon chain-like.	piggyBac transposable element-derived protein 4-like.	0.908
LOC106514964	LOC106521072	A0A2I4AWV5	A0A2I4BMH4	T-cell surface glycoprotein CD3 epsilon chain-like.	T-cell surface glycoprotein CD3 delta chain-like.	0.988
LOC106514964	cd8a	A0A2I4AWV5	A0A2I4BXT1	T-cell surface glycoprotein CD3 epsilon chain-like.	T-cell surface glycoprotein CD8 alpha chain isoform X1.	0.880
LOC106514970	LOC106512352	A0A2I4AWW0	A0A2I4ALS6	T-cell surface glycoprotein CD3 epsilon chain-like.	piggyBac transposable element-derived protein 3-like.	0.908
LOC106514970	LOC106517451	A0A2I4AWW0	A0A2I4B7P3	T-cell surface glycoprotein CD3 epsilon chain-like.	piggyBac transposable element-derived protein 4-like.	0.953
LOC106514970	LOC106517590	A0A2I4AWW0	A0A2I4B8A0	T-cell surface glycoprotein CD3 epsilon chain-like.	T-cell surface glycoprotein CD3 zeta chain-like.	0.979
LOC106514970	LOC106519090	A0A2I4AWW0	A0A2I4BEA7	T-cell surface glycoprotein CD3 epsilon chain-like.	piggyBac transposable element-derived protein 4-like.	0.908
LOC106514970	LOC106521072	A0A2I4AWW0	A0A2I4BMH4	T-cell surface glycoprotein CD3 epsilon chain-like.	T-cell surface glycoprotein CD3 delta chain-like.	0.988
LOC106514970	cd8a	A0A2I4AWW0	A0A2I4BXT1	T-cell surface glycoprotein CD3 epsilon chain-like.	T-cell surface glycoprotein CD8 alpha chain isoform X1.	0.880
LOC106515333	LOC106514946	A0A2I4AYE5	A0A2I4AWT4	Uncharacterized protein LOC106515333.	CMRF35-like molecule 5.	0.900