STRINGSTRING
LOC106511350 LOC106511350 LOC106511320 LOC106511320 LOC106511517 LOC106511517 LOC106511650 LOC106511650 LOC106511762 LOC106511762 LOC106511761 LOC106511761 LOC106511756 LOC106511756 LOC106512612 LOC106512612 fign fign LOC106513562 LOC106513562 katnal2 katnal2 adgrb3 adgrb3 nup155 nup155 cdk1 cdk1 ppp2r1b ppp2r1b spast spast nup188 nup188 ran ran ndc1 ndc1 LOC106517665 LOC106517665 LOC106518055 LOC106518055 iqca1 iqca1 seh1l seh1l chmp2b chmp2b vrk1 vrk1 LOC106520125 LOC106520125 rangap1 rangap1 cc2d1b cc2d1b LOC106520975 LOC106520975 chmp3 chmp3 lemd3 lemd3 LOC106521910 LOC106521910 chmp2a chmp2a nup85 nup85 LOC106522088 LOC106522088 sirt2 sirt2 LOC106523121 LOC106523121 chmp4b chmp4b ahctf1 ahctf1 LOC106523857 LOC106523857 ankle2 ankle2 pom121 pom121 sec13 sec13 LOC106525324 LOC106525324 LOC106525477 LOC106525477 fignl1 fignl1 LOC106525628 LOC106525628 LOC106526807 LOC106526807 LOC106527015 LOC106527015 kpnb1 kpnb1 adgrd1 adgrd1 LOC106528437 LOC106528437 LOC106528890 LOC106528890 chmp6 chmp6 LOC106530053 LOC106530053 nup37 nup37 ist1 ist1 ccnb3 ccnb3 tm9sf1 tm9sf1 nup160 nup160 LOC106531094 LOC106531094 nup133 nup133 sumo1 sumo1 LOC106531456 LOC106531456 LOC106532053 LOC106532053 LOC106532104 LOC106532104 LOC106532103 LOC106532103 LOC106532192 LOC106532192 wdr41 wdr41 rcc1 rcc1 ccnb1 ccnb1 nup43 nup43 nup35 nup35 LOC106534815 LOC106534815 nup107 nup107 LOC106536135 LOC106536135 chmp7 chmp7 LOC106536379 LOC106536379 vps4a vps4a nup93 nup93 nup205 nup205
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106511350Nuclear pore complex protein Nup98-Nup96-like. (951 aa)
LOC106511320Charged multivesicular body protein 4b. (222 aa)
LOC106511517Nuclear pore complex protein Nup133-like. (510 aa)
LOC106511650Nuclear pore complex protein Nup133-like. (480 aa)
LOC106511762Nuclear pore complex protein Nup98-Nup96-like. (208 aa)
LOC106511761Nuclear pore complex protein Nup98-Nup96-like. (318 aa)
LOC106511756Nuclear pore complex protein Nup98-Nup96-like. (212 aa)
LOC106512612Protein ELYS-like. (114 aa)
fignFidgetin isoform X1; Belongs to the AAA ATPase family. (746 aa)
LOC106513562Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (445 aa)
katnal2Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays. (517 aa)
adgrb3Brain-specific angiogenesis inhibitor 3; Belongs to the G-protein coupled receptor 2 family. (1625 aa)
nup155Nuclear pore complex protein Nup155. (1367 aa)
cdk1Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily. (301 aa)
ppp2r1bSerine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform. (589 aa)
spastSpastin isoform X1; Belongs to the AAA ATPase family. (472 aa)
nup188Nucleoporin NUP188 homolog isoform X1. (1750 aa)
ranGTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (219 aa)
ndc1Nucleoporin NDC1 isoform X1. (668 aa)
LOC106517665Nuclear receptor coactivator 5-like isoform X1. (640 aa)
LOC106518055Putative fidgetin-like protein 2 isoform X1. (394 aa)
iqca1IQ and AAA domain-containing protein 1. (809 aa)
seh1lNucleoporin SEH1 isoform X1; Belongs to the WD repeat SEC13 family. (415 aa)
chmp2bCharged multivesicular body protein 2b. (215 aa)
vrk1Serine/threonine-protein kinase VRK1; Belongs to the protein kinase superfamily. (442 aa)
LOC106520125Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (448 aa)
rangap1Ran GTPase-activating protein 1 isoform X1. (588 aa)
cc2d1bCoiled-coil and C2 domain-containing protein 1B isoform X1. (842 aa)
LOC106520975Charged multivesicular body protein 4c-like. (239 aa)
chmp3Charged multivesicular body protein 3 isoform X1. (220 aa)
lemd3Inner nuclear membrane protein Man1. (827 aa)
LOC106521910Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (446 aa)
chmp2aCharged multivesicular body protein 2a. (220 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (651 aa)
LOC106522088Protein Njmu-R1 isoform X1. (405 aa)
sirt2NAD-dependent protein deacetylase; NAD-dependent protein deacetylase. (383 aa)
LOC106523121Barrier-to-autointegration factor. (90 aa)
chmp4bCharged multivesicular body protein 4b. (221 aa)
ahctf1Protein ELYS. (2495 aa)
LOC106523857lamin-B2-like; Belongs to the intermediate filament family. (578 aa)
ankle2Ankyrin repeat and LEM domain-containing protein 2 isoform X1. (963 aa)
pom121Nuclear envelope pore membrane protein POM 121. (1110 aa)
sec13Protein SEC13 homolog; Belongs to the WD repeat SEC13 family. (320 aa)
LOC106525324Putative fidgetin-like protein 2. (689 aa)
LOC106525477Adhesion G protein-coupled receptor B2-like; Belongs to the G-protein coupled receptor 2 family. (1622 aa)
fignl1Fidgetin-like protein 1; Belongs to the AAA ATPase family. (628 aa)
LOC106525628Cyclin N-terminal domain-containing protein 2-like; Belongs to the cyclin family. (353 aa)
LOC106526807Serine/threonine-protein kinase VRK1-like isoform X1. (556 aa)
LOC106527015X-linked retinitis pigmentosa GTPase regulator-like. (658 aa)
kpnb1Importin subunit beta-1. (876 aa)
adgrd1Adhesion G-protein coupled receptor D1; Belongs to the G-protein coupled receptor 2 family. (915 aa)
LOC106528437Nuclear receptor coactivator 5-like. (418 aa)
LOC106528890Brain-specific angiogenesis inhibitor 1-like isoform X1; Belongs to the G-protein coupled receptor 2 family. (1506 aa)
chmp6Charged multivesicular body protein 6. (204 aa)
LOC106530053Charged multivesicular body protein 6-like. (207 aa)
nup37Nucleoporin Nup37. (326 aa)
ist1IST1 homolog isoform X1. (348 aa)
ccnb3G2/mitotic-specific cyclin-B3; Belongs to the cyclin family. (426 aa)
tm9sf1Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (594 aa)
nup160Nuclear pore complex protein Nup160 isoform X1. (1419 aa)
LOC106531094Coiled-coil and C2 domain-containing protein 1A-like. (1000 aa)
nup133Nuclear pore complex protein Nup133. (1137 aa)
sumo1Small ubiquitin-related modifier. (101 aa)
LOC106531456Fidgetin-like. (766 aa)
LOC106532053G2/mitotic-specific cyclin-B2-like; Belongs to the cyclin family. (409 aa)
LOC106532104Nuclear pore complex protein Nup98-Nup96-like. (90 aa)
LOC106532103Nuclear pore complex protein Nup98-Nup96-like. (1631 aa)
LOC106532192Dynein heavy chain-like isoform X1. (430 aa)
wdr41WD repeat-containing protein 41. (450 aa)
rcc1Regulator of chromosome condensation. (418 aa)
ccnb1G2/mitotic-specific cyclin-B1; Belongs to the cyclin family. (398 aa)
nup43Nucleoporin Nup43. (369 aa)
nup35Nucleoporin NUP53. (280 aa)
LOC106534815Adhesion G protein-coupled receptor B2-like. (906 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (906 aa)
LOC106536135Brain-specific angiogenesis inhibitor 1-like; Belongs to the G-protein coupled receptor 2 family. (1071 aa)
chmp7Charged multivesicular body protein 7 isoform X1. (474 aa)
LOC106536379Barrier-to-autointegration factor-like. (90 aa)
vps4aVacuolar protein sorting-associated protein 4A; Belongs to the AAA ATPase family. (436 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (819 aa)
nup205Nuclear pore complex protein Nup205. (1993 aa)
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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