39 items (Austrofundulus limnaeus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106511756	Nuclear pore complex protein Nup98-Nup96-like. (212 aa)
	LOC106511762	Nuclear pore complex protein Nup98-Nup96-like. (208 aa)
	LOC106511650	Nuclear pore complex protein Nup133-like. (480 aa)
	LOC106511517	Nuclear pore complex protein Nup133-like. (510 aa)
	LOC106511350	Nuclear pore complex protein Nup98-Nup96-like. (951 aa)
	nup85	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (651 aa)
	ahctf1	Protein ELYS. (2495 aa)
	pom121	Nuclear envelope pore membrane protein POM 121. (1110 aa)
	sec13	Protein SEC13 homolog; Belongs to the WD repeat SEC13 family. (320 aa)
	LOC106525477	Adhesion G protein-coupled receptor B2-like; Belongs to the G-protein coupled receptor 2 family. (1622 aa)
	LOC106536135	Brain-specific angiogenesis inhibitor 1-like; Belongs to the G-protein coupled receptor 2 family. (1071 aa)
	nup93	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (819 aa)
	nup205	Nuclear pore complex protein Nup205. (1993 aa)
	LOC106527015	X-linked retinitis pigmentosa GTPase regulator-like. (658 aa)
	adgrd1	Adhesion G-protein coupled receptor D1; Belongs to the G-protein coupled receptor 2 family. (915 aa)
	LOC106528437	Nuclear receptor coactivator 5-like. (418 aa)
	LOC106528890	Brain-specific angiogenesis inhibitor 1-like isoform X1; Belongs to the G-protein coupled receptor 2 family. (1506 aa)
	nup37	Nucleoporin Nup37. (326 aa)
	nup160	Nuclear pore complex protein Nup160 isoform X1. (1419 aa)
	nup133	Nuclear pore complex protein Nup133. (1137 aa)
	sumo1	Small ubiquitin-related modifier. (101 aa)
	LOC106532104	Nuclear pore complex protein Nup98-Nup96-like. (90 aa)
	LOC106532103	Nuclear pore complex protein Nup98-Nup96-like. (1631 aa)
	LOC106532192	Dynein heavy chain-like isoform X1. (430 aa)
	rcc1	Regulator of chromosome condensation. (418 aa)
	nup43	Nucleoporin Nup43. (369 aa)
	nup35	Nucleoporin NUP53. (280 aa)
	LOC106534815	Adhesion G protein-coupled receptor B2-like. (906 aa)
	nup107	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (906 aa)
	seh1l	Nucleoporin SEH1 isoform X1; Belongs to the WD repeat SEC13 family. (415 aa)
	LOC106517665	Nuclear receptor coactivator 5-like isoform X1. (640 aa)
	ndc1	Nucleoporin NDC1 isoform X1. (668 aa)
	ran	GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (219 aa)
	rangap1	Ran GTPase-activating protein 1 isoform X1. (588 aa)
	nup188	Nucleoporin NUP188 homolog isoform X1. (1750 aa)
	nup155	Nuclear pore complex protein Nup155. (1367 aa)
	adgrb3	Brain-specific angiogenesis inhibitor 3; Belongs to the G-protein coupled receptor 2 family. (1625 aa)
	LOC106512612	Protein ELYS-like. (114 aa)
	LOC106511761	Nuclear pore complex protein Nup98-Nup96-like. (318 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106511350	LOC106511517	A0A2I4AJ60	A0A2I4AJS7	Nuclear pore complex protein Nup98-Nup96-like.	Nuclear pore complex protein Nup133-like.	0.777
LOC106511350	LOC106511650	A0A2I4AJ60	A0A2I4AK63	Nuclear pore complex protein Nup98-Nup96-like.	Nuclear pore complex protein Nup133-like.	0.777
LOC106511350	LOC106511756	A0A2I4AJ60	A0A2I4AKF8	Nuclear pore complex protein Nup98-Nup96-like.	Nuclear pore complex protein Nup98-Nup96-like.	0.929
LOC106511350	LOC106511762	A0A2I4AJ60	A0A2I4AKB3	Nuclear pore complex protein Nup98-Nup96-like.	Nuclear pore complex protein Nup98-Nup96-like.	0.714
LOC106511350	LOC106512612	A0A2I4AJ60	A0A2I4AMH0	Nuclear pore complex protein Nup98-Nup96-like.	Protein ELYS-like.	0.763
LOC106511350	LOC106525477	A0A2I4AJ60	A0A2I4C5C1	Nuclear pore complex protein Nup98-Nup96-like.	Adhesion G protein-coupled receptor B2-like; Belongs to the G-protein coupled receptor 2 family.	0.440
LOC106511350	LOC106528890	A0A2I4AJ60	A0A2I4CI12	Nuclear pore complex protein Nup98-Nup96-like.	Brain-specific angiogenesis inhibitor 1-like isoform X1; Belongs to the G-protein coupled receptor 2 family.	0.440
LOC106511350	LOC106532103	A0A2I4AJ60	A0A2I4CU87	Nuclear pore complex protein Nup98-Nup96-like.	Nuclear pore complex protein Nup98-Nup96-like.	0.901
LOC106511350	LOC106534815	A0A2I4AJ60	A0A2I4D459	Nuclear pore complex protein Nup98-Nup96-like.	Adhesion G protein-coupled receptor B2-like.	0.440
LOC106511350	LOC106536135	A0A2I4AJ60	A0A2I4D968	Nuclear pore complex protein Nup98-Nup96-like.	Brain-specific angiogenesis inhibitor 1-like; Belongs to the G-protein coupled receptor 2 family.	0.440
LOC106511350	adgrb3	A0A2I4AJ60	A0A2I4ARN2	Nuclear pore complex protein Nup98-Nup96-like.	Brain-specific angiogenesis inhibitor 3; Belongs to the G-protein coupled receptor 2 family.	0.440
LOC106511350	adgrd1	A0A2I4AJ60	A0A2I4CFW8	Nuclear pore complex protein Nup98-Nup96-like.	Adhesion G-protein coupled receptor D1; Belongs to the G-protein coupled receptor 2 family.	0.553
LOC106511350	ahctf1	A0A2I4AJ60	A0A2I4BY29	Nuclear pore complex protein Nup98-Nup96-like.	Protein ELYS.	0.763
LOC106511350	ndc1	A0A2I4AJ60	A0A2I4B5B4	Nuclear pore complex protein Nup98-Nup96-like.	Nucleoporin NDC1 isoform X1.	0.731
LOC106511350	nup107	A0A2I4AJ60	A0A2I4D7X6	Nuclear pore complex protein Nup98-Nup96-like.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.872
LOC106511350	nup133	A0A2I4AJ60	A0A2I4CRL6	Nuclear pore complex protein Nup98-Nup96-like.	Nuclear pore complex protein Nup133.	0.777
LOC106511350	nup155	A0A2I4AJ60	A0A2I4AUI1	Nuclear pore complex protein Nup98-Nup96-like.	Nuclear pore complex protein Nup155.	0.869
LOC106511350	nup160	A0A2I4AJ60	A0A2I4CQG2	Nuclear pore complex protein Nup98-Nup96-like.	Nuclear pore complex protein Nup160 isoform X1.	0.863
LOC106511350	nup188	A0A2I4AJ60	A0A2I4B2L6	Nuclear pore complex protein Nup98-Nup96-like.	Nucleoporin NUP188 homolog isoform X1.	0.790
LOC106511350	nup205	A0A2I4AJ60	A0A2I4DCP2	Nuclear pore complex protein Nup98-Nup96-like.	Nuclear pore complex protein Nup205.	0.840