41 items (Austrofundulus limnaeus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	calml4	Calmodulin-like protein 4. (153 aa)
	LOC106513617	Phosphodiesterase. (791 aa)
	grk1	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (563 aa)
	slc24a1	Sodium/potassium/calcium exchanger 1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (710 aa)
	LOC106514534	Phosphodiesterase. (853 aa)
	guca1a	Guanylyl cyclase-activating protein 1. (189 aa)
	LOC106516078	Rhodopsin. (352 aa)
	LOC106516079	Guanine nucleotide-binding protein G(T) subunit alpha-1. (350 aa)
	LOC106516123	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1-like. (340 aa)
	LOC106516359	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (559 aa)
	LOC106517158	Cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like. (659 aa)
	gnb1	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1. (340 aa)
	rgs9	Regulator of G-protein signaling 9 isoform X1. (659 aa)
	guca1b	Guanylyl cyclase-activating protein 2. (197 aa)
	LOC106519589	Recoverin-like. (192 aa)
	LOC106519820	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (561 aa)
	LOC106520507	Visinin-like. (193 aa)
	LOC106520588	Guanylyl cyclase-activating protein 1-like. (189 aa)
	rho	Rhodopsin. (353 aa)
	grk7	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (546 aa)
	gucy2f	Guanylate cyclase. (1096 aa)
	LOC106525641	Guanylate cyclase. (1099 aa)
	LOC106525808	Guanine nucleotide-binding protein G(T) subunit alpha-2-like. (350 aa)
	LOC106525982	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (73 aa)
	LOC106526525	Calmodulin-like; Belongs to the calmodulin family. (113 aa)
	LOC106527471	Calmodulin; Belongs to the calmodulin family. (149 aa)
	LOC106528268	Rhodopsin. (354 aa)
	LOC106528544	Retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like. (90 aa)
	LOC106528614	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (556 aa)
	pde6g	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma. (87 aa)
	cngb1	Cyclic nucleotide-gated cation channel beta-1. (705 aa)
	LOC106530023	Regulator of G-protein signaling 9-like. (481 aa)
	LOC106531176	S-arrestin-like. (398 aa)
	LOC106532110	Guanylyl cyclase-activating protein 1-like. (189 aa)
	LOC106534188	Guanylyl cyclase-activating protein 2-like. (165 aa)
	LOC106534425	Guanylate cyclase. (1015 aa)
	LOC106534441	S-arrestin-like. (387 aa)
	LOC106535568	cGMP-gated cation channel alpha-1-like. (584 aa)
	LOC106535897	Guanylyl cyclase-activating protein 2-like. (194 aa)
	LOC106536738	S-modulin-like. (263 aa)
	LOC106536777	Cyclic nucleotide-gated cation channel beta-1-like. (1315 aa)

Your Current Organism:

Austrofundulus limnaeus

NCBI taxonomy Id: 52670
Other names: A. limnaeus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106513617	LOC106514534	A0A2I4AR80	A0A2I4AUX8	Phosphodiesterase.	Phosphodiesterase.	0.960
LOC106513617	LOC106516079	A0A2I4AR80	A0A2I4B1W5	Phosphodiesterase.	Guanine nucleotide-binding protein G(T) subunit alpha-1.	0.919
LOC106513617	LOC106516123	A0A2I4AR80	A0A2I4B221	Phosphodiesterase.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1-like.	0.755
LOC106513617	LOC106516359	A0A2I4AR80	A0A2I4B2Z4	Phosphodiesterase.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.593
LOC106513617	LOC106519820	A0A2I4AR80	A0A2I4BHA6	Phosphodiesterase.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.506
LOC106513617	LOC106525641	A0A2I4AR80	A0A2I4C5V8	Phosphodiesterase.	Guanylate cyclase.	0.864
LOC106513617	LOC106525808	A0A2I4AR80	A0A2I4C6L9	Phosphodiesterase.	Guanine nucleotide-binding protein G(T) subunit alpha-2-like.	0.909
LOC106513617	LOC106525982	A0A2I4AR80	A0A2I4C773	Phosphodiesterase.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.767
LOC106513617	LOC106528544	A0A2I4AR80	A0A2I4CGS0	Phosphodiesterase.	Retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like.	0.956
LOC106513617	LOC106530023	A0A2I4AR80	A0A2I4CM10	Phosphodiesterase.	Regulator of G-protein signaling 9-like.	0.426
LOC106513617	LOC106534425	A0A2I4AR80	A0A2I4D2Q0	Phosphodiesterase.	Guanylate cyclase.	0.777
LOC106513617	gnb1	A0A2I4AR80	A0A2I4BDN4	Phosphodiesterase.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	0.755
LOC106513617	grk1	A0A2I4AR80	A0A2I4ASM4	Phosphodiesterase.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.506
LOC106513617	guca1a	A0A2I4AR80	A0A2I4AW54	Phosphodiesterase.	Guanylyl cyclase-activating protein 1.	0.413
LOC106513617	gucy2f	A0A2I4AR80	A0A2I4C149	Phosphodiesterase.	Guanylate cyclase.	0.785
LOC106513617	pde6g	A0A2I4AR80	A0A2I4CIL5	Phosphodiesterase.	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma.	0.988
LOC106513617	rgs9	A0A2I4AR80	A0A2I4BDX9	Phosphodiesterase.	Regulator of G-protein signaling 9 isoform X1.	0.426
LOC106514534	LOC106513617	A0A2I4AUX8	A0A2I4AR80	Phosphodiesterase.	Phosphodiesterase.	0.960
LOC106514534	LOC106516079	A0A2I4AUX8	A0A2I4B1W5	Phosphodiesterase.	Guanine nucleotide-binding protein G(T) subunit alpha-1.	0.919
LOC106514534	LOC106516123	A0A2I4AUX8	A0A2I4B221	Phosphodiesterase.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1-like.	0.787