STRINGSTRING
KNZ43397.1 KNZ43397.1 rnfB rnfB KNZ42374.1 KNZ42374.1 KNZ42504.1 KNZ42504.1 KNZ42973.1 KNZ42973.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KNZ43397.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)
rnfBElectron transporter RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. (335 aa)
KNZ42374.1acetyl-CoA synthase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology. (446 aa)
KNZ42504.1Fe-S cluster protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa)
KNZ42973.1Hydrogenase assembly protein HupF; Derived by automated computational analysis using gene prediction method: Protein Homology. (568 aa)
Your Current Organism:
Acetobacterium bakii
NCBI taxonomy Id: 52689
Other names: A. bakii, ATCC 51794, DSM 8239, strain Z-4391
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