STRINGSTRING
BN2166_0001750 BN2166_0001750 BN2166_0009700 BN2166_0009700 BN2166_0005860 BN2166_0005860 BN2166_0009760 BN2166_0009760 BN2166_0010910 BN2166_0010910 BN2166_0001120 BN2166_0001120 BN2166_0031200 BN2166_0031200 BN2166_0034040 BN2166_0034040 BN2166_0035760 BN2166_0035760 BN2166_0035960 BN2166_0035960 BN2166_0047980 BN2166_0047980 BN2166_0035770 BN2166_0035770 BN2166_0057560 BN2166_0057560 BN2166_0062930 BN2166_0062930 BN2166_0066340 BN2166_0066340 BN2166_0061460 BN2166_0061460
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0001750BY PROTMAP: gi|342320661|gb|EGU12600.1| STE/STE11 protein kinase [Rhodotorula glutinis ATCC 204091]. (1427 aa)
BN2166_0009700Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (439 aa)
BN2166_0005860Plasma membrane osmosensor that activates the high osmolarity glycerol (HOG) MAPK signaling pathway in response to high osmolarity. (299 aa)
BN2166_0009760Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (347 aa)
BN2166_0010910annotation not available (647 aa)
BN2166_0001120BY PROTMAP: gi|647395577|emb|CDR37101.1| RHTO0S02e10792g1_1 [Rhodosporidium toruloides]. (1586 aa)
BN2166_0031200BY PROTMAP: gi|647403364|emb|CDR49492.1| RHTO0S27e00804g2_1 [Rhodosporidium toruloides]. (1109 aa)
BN2166_0034040annotation not available (542 aa)
BN2166_0035760Protein kinase domain-containing protein. (345 aa)
BN2166_0035960annotation not available (644 aa)
BN2166_0047980FGENESH: predicted gene_9.144 protein. (677 aa)
BN2166_0035770FGENESH: predicted gene_6.499 protein. (94 aa)
BN2166_0057560BY PROTMAP: gi|647399476|emb|CDR44299.1| RHTO0S09e02190g1_1 [Rhodosporidium toruloides]. (402 aa)
BN2166_0062930Stretch-activated Ca2+-permeable channel component-domain containing protein. (609 aa)
BN2166_0066340Protein kinase-like domain-containing protein. (511 aa)
BN2166_0061460FGENESH: predicted gene_12.306 protein. (1434 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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