STRINGSTRING
BN2166_0002750 BN2166_0002750 BN2166_0007200 BN2166_0007200 BN2166_0011250 BN2166_0011250 BN2166_0015600 BN2166_0015600 BN2166_0004760 BN2166_0004760 BN2166_0009280 BN2166_0009280 BN2166_0009560 BN2166_0009560 BN2166_0010810 BN2166_0010810 BN2166_0013330 BN2166_0013330 BN2166_0018380 BN2166_0018380 BN2166_0031300 BN2166_0031300 BN2166_0025140 BN2166_0025140 BN2166_0027430 BN2166_0027430 BN2166_0027730 BN2166_0027730 BN2166_0029560 BN2166_0029560 BN2166_0035360 BN2166_0035360 BN2166_0040240 BN2166_0040240 BN2166_0040690 BN2166_0040690 BN2166_0027320 BN2166_0027320 BN2166_0052000 BN2166_0052000 BN2166_0046090 BN2166_0046090 BN2166_0056390 BN2166_0056390 BN2166_0051960 BN2166_0051960 BN2166_0058590 BN2166_0058590 BN2166_0058730 BN2166_0058730 BN2166_0061590 BN2166_0061590 BN2166_0064040 BN2166_0064040 BN2166_0046220 BN2166_0046220 BN2166_0047370 BN2166_0047370 BN2166_0074450 BN2166_0074450 BN2166_0062910 BN2166_0062910 BN2166_0068930 BN2166_0068930 BN2166_0067410 BN2166_0067410 BN2166_0060370 BN2166_0060370 BN2166_0062020 BN2166_0062020 BN2166_0064270 BN2166_0064270
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0002750BY PROTMAP: gi|342319357|gb|EGU11306.1| DNA repair protein rad5 [Rhodotorula glutinis ATCC 204091]. (918 aa)
BN2166_0007200annotation not available (487 aa)
BN2166_0011250SNF2 family N-terminal domain-domain containing protein. (1158 aa)
BN2166_0015600annotation not available (1265 aa)
BN2166_0004760annotation not available (467 aa)
BN2166_0009280BY PROTMAP: gi|647397983|emb|CDR41493.1| RHTO0S06e02322g1_1 [Rhodosporidium toruloides]. (1311 aa)
BN2166_0009560annotation not available (720 aa)
BN2166_0010810SNF2 family N-terminal domain-domain containing protein. (896 aa)
BN2166_0013330Uncharacterized protein. (886 aa)
BN2166_0018380BY PROTMAP: gi|342319877|gb|EGU11822.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1278 aa)
BN2166_0031300Belongs to the actin family. (794 aa)
BN2166_0025140BY PROTMAP: gi|342320840|gb|EGU12778.1| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]. (872 aa)
BN2166_0027430BY PROTMAP: gi|342320929|gb|EGU12867.1| Transcription factor [Rhodotorula glutinis ATCC 204091]. (689 aa)
BN2166_0027730Putative DNA helicase INO80. (1591 aa)
BN2166_0029560annotation not available (1487 aa)
BN2166_0035360SNF2 family N-terminal domain-domain containing protein. (1010 aa)
BN2166_0040240BY PROTMAP: gi|342320419|gb|EGU12359.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1583 aa)
BN2166_0040690annotation not available (558 aa)
BN2166_0027320Von Willebrand factor type A domain-domain containing protein. (905 aa)
BN2166_0052000BY PROTMAP: gi|647394568|emb|CDR35799.1| RHTO0S01e07360g1_1 [Rhodosporidium toruloides]. (942 aa)
BN2166_0046090Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (798 aa)
BN2166_0056390Proteophosphoglycan 5. (403 aa)
BN2166_0051960BY PROTMAP: gi|342319269|gb|EGU11219.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1144 aa)
BN2166_0058590BY PROTMAP: gi|647398513|emb|CDR42529.1| RHTO0S07e00518g1_1 [Rhodosporidium toruloides]. (562 aa)
BN2166_0058730FGENESH: predicted gene_12.33 protein. (522 aa)
BN2166_0061590BY PROTMAP: gi|472586134|gb|EMS23662.1| nucleus protein [Rhodosporidium toruloides NP11]. (198 aa)
BN2166_0064040RAD26-like SNF2 family DNA-dependent ATPase. (1445 aa)
BN2166_0046220Uncharacterized protein. (565 aa)
BN2166_0047370annotation not available (743 aa)
BN2166_0074450DNA repair protein, SNF2 family. (852 aa)
BN2166_0062910annotation not available (142 aa)
BN2166_0068930Uncharacterized protein. (1118 aa)
BN2166_0067410FGENESH: predicted gene_15.22 protein. (183 aa)
BN2166_0060370Uncharacterized protein; Belongs to the actin family. (948 aa)
BN2166_0062020BY PROTMAP: gi|342319449|gb|EGU11397.1| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]. (1859 aa)
BN2166_0064270BY PROTMAP: gi|647402457|emb|CDR48713.1| RHTO0S19e03026g1_1 [Rhodosporidium toruloides]. (1404 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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