STRINGSTRING
BN2166_0000490 BN2166_0000490 BN2166_0009790 BN2166_0009790 BN2166_0050150 BN2166_0050150 BN2166_0033120 BN2166_0033120 BN2166_0063410 BN2166_0063410
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0000490annotation not available (138 aa)
BN2166_0009790RNA polymerase Rpb3/Rpb11 dimerization domain-domain containing protein. (171 aa)
BN2166_0050150FGENESH: predicted gene_9.361 protein. (140 aa)
BN2166_0033120BY PROTMAP: gi|647399978|emb|CDR45008.1| RHTO0S10e04126g1_1 [Rhodosporidium toruloides]. (210 aa)
BN2166_0063410RPOLD domain-containing protein. (797 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.