STRINGSTRING
BN2166_0046640 BN2166_0046640 BN2166_0010750 BN2166_0010750 BN2166_0000480 BN2166_0000480 BN2166_0005890 BN2166_0005890 BN2166_0002460 BN2166_0002460 BN2166_0003360 BN2166_0003360 BN2166_0004360 BN2166_0004360 BN2166_0005810 BN2166_0005810 BN2166_0007480 BN2166_0007480 BN2166_0019750 BN2166_0019750 BN2166_0010680 BN2166_0010680 BN2166_0023450 BN2166_0023450 BN2166_0018290 BN2166_0018290 BN2166_0016080 BN2166_0016080 BN2166_0028300 BN2166_0028300 BN2166_0028350 BN2166_0028350 BN2166_0016210 BN2166_0016210 BN2166_0029300 BN2166_0029300 BN2166_0030450 BN2166_0030450 BN2166_0019510 BN2166_0019510 BN2166_0005670 BN2166_0005670 BN2166_0019610 BN2166_0019610 BN2166_0019760 BN2166_0019760 BN2166_0021680 BN2166_0021680 BN2166_0022080 BN2166_0022080 BN2166_0008370 BN2166_0008370 BN2166_0034400 BN2166_0034400 BN2166_0026840 BN2166_0026840 BN2166_0036300 BN2166_0036300 BN2166_0012020 BN2166_0012020 BN2166_0026010 BN2166_0026010 BN2166_0038650 BN2166_0038650 BN2166_0027160 BN2166_0027160 BN2166_0040250 BN2166_0040250 BN2166_0028730 BN2166_0028730 BN2166_0042300 BN2166_0042300 BN2166_0044000 BN2166_0044000 BN2166_0019470 BN2166_0019470 BN2166_0033280 BN2166_0033280 BN2166_0036530 BN2166_0036530 BN2166_0048750 BN2166_0048750 BN2166_0038110 BN2166_0038110 BN2166_0042240 BN2166_0042240 BN2166_0026220 BN2166_0026220 BN2166_0027720 BN2166_0027720 BN2166_0052550 BN2166_0052550 BN2166_0045430 BN2166_0045430 BN2166_0058050 BN2166_0058050 BN2166_0051140 BN2166_0051140 BN2166_0060000 BN2166_0060000 BN2166_0049110 BN2166_0049110 BN2166_0037270 BN2166_0037270 BN2166_0052260 BN2166_0052260 BN2166_0054980 BN2166_0054980 BN2166_0052760 BN2166_0052760 BN2166_0057990 BN2166_0057990 BN2166_0057780 BN2166_0057780 BN2166_0058130 BN2166_0058130 BN2166_0068350 BN2166_0068350 BN2166_0056310 BN2166_0056310 BN2166_0059410 BN2166_0059410 BN2166_0065240 BN2166_0065240 BN2166_0048770 BN2166_0048770 BN2166_0048920 BN2166_0048920 BN2166_0073750 BN2166_0073750 BN2166_0062410 BN2166_0062410 BN2166_0067740 BN2166_0067740 BN2166_0051120 BN2166_0051120 BN2166_0069340 BN2166_0069340 BN2166_0051320 BN2166_0051320 BN2166_0068730 BN2166_0068730 BN2166_0067110 BN2166_0067110 BN2166_0069630 BN2166_0069630 BN2166_0070430 BN2166_0070430 BN2166_0074190 BN2166_0074190 BN2166_0074510 BN2166_0074510 BN2166_0069970 BN2166_0069970
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0046640Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (90 aa)
BN2166_0010750Uncharacterized protein. (927 aa)
BN2166_0000480BY PROTMAP: gi|647402938|emb|CDR49126.1| RHTO0S23e01178g1_1 [Rhodosporidium toruloides]; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1628 aa)
BN2166_0005890BY PROTMAP: gi|647396226|emb|CDR38250.1| RHTO0S03e06766g1_1 [Rhodosporidium toruloides]; Belongs to the peptidase C19 family. (1037 aa)
BN2166_0002460BY PROTMAP: gi|814541099|emb|CEQ41539.1| SPOSA6832_03267 [Sporidiobolus salmonicolor]; Belongs to the cyclin family. (517 aa)
BN2166_0003360tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...] (470 aa)
BN2166_0004360zf-RING-like domain-containing protein. (425 aa)
BN2166_0005810annotation not available (628 aa)
BN2166_0007480Kinesin motor domain-domain containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1084 aa)
BN2166_0019750FGENESH: predicted gene_3.426 protein. (329 aa)
BN2166_0010680BY PROTMAP: gi|342319928|gb|EGU11873.1| Cysteine peptidase C50 [Rhodotorula glutinis ATCC 204091]. (2219 aa)
BN2166_0023450Belongs to the ubiquitin-conjugating enzyme family. (184 aa)
BN2166_0018290Protein kinase-like domain-containing protein; Belongs to the protein kinase superfamily. (431 aa)
BN2166_0016080WD-40 repeat-containing protein. (478 aa)
BN2166_0028300Uncharacterized protein. (423 aa)
BN2166_0028350Structural maintenance of chromosomes protein. (1243 aa)
BN2166_0016210annotation not available (705 aa)
BN2166_0029300Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1289 aa)
BN2166_0030450Rhodanese-like domain-containing protein. (178 aa)
BN2166_0019510ANAPC5 domain-containing protein. (680 aa)
BN2166_0005670Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. (836 aa)
BN2166_0019610Spindle assembly checkpoint component Mad1. (802 aa)
BN2166_0019760annotation not available (230 aa)
BN2166_0021680BY PROTMAP: gi|342321674|gb|EGU13606.1| Wee1 [Rhodotorula glutinis ATCC 204091]. (1790 aa)
BN2166_0022080BY PROTMAP: gi|814541299|emb|CEQ41283.1| SPOSA6832_02986, partial [Sporidiobolus salmonicolor]; Belongs to the small GTPase superfamily. Arf family. (158 aa)
BN2166_0008370MAGE family-domain containing protein. (425 aa)
BN2166_0034400BY PROTMAP: gi|342319711|gb|EGU11658.1| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]. (1296 aa)
BN2166_0026840annotation not available (442 aa)
BN2166_0036300annotation not available (1530 aa)
BN2166_0012020P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1134 aa)
BN2166_0026010P-loop containing nucleoside triphosphate hydrolase protein. (1185 aa)
BN2166_0038650BY PROTMAP: gi|647398831|emb|CDR43065.1| RHTO0S07e07668g1_1 [Rhodosporidium toruloides]. (679 aa)
BN2166_0027160Belongs to the cullin family. (746 aa)
BN2166_0040250Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (106 aa)
BN2166_0028730Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (182 aa)
BN2166_0042300Cell division control protein 16. (727 aa)
BN2166_0044000Nuclear condensing complex subunit. (959 aa)
BN2166_0019470annotation not available (650 aa)
BN2166_0033280annotation not available (1110 aa)
BN2166_0036530Putative 20S cyclosome subunit BimA/Nuc2/Cdc27. (921 aa)
BN2166_0048750Chalcone-flavanone isomerase-domain containing protein. (322 aa)
BN2166_0038110annotation not available (926 aa)
BN2166_0042240BY PROTMAP: gi|342321621|gb|EGU13554.1| HORMA domain protein [Rhodotorula glutinis ATCC 204091]. (224 aa)
BN2166_0026220BY PROTMAP: gi|342320882|gb|EGU12820.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (579 aa)
BN2166_0027720BY PROTMAP: gi|647399037|emb|CDR43407.1| RHTO0S08e01508g1_1 [Rhodosporidium toruloides]. (1125 aa)
BN2166_0052550annotation not available (701 aa)
BN2166_0045430Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (328 aa)
BN2166_0058050RING finger domain-containing protein. (128 aa)
BN2166_0051140Structural maintenance of chromosomes protein. (1205 aa)
BN2166_0060000WD40-repeat-containing domain protein. (599 aa)
BN2166_0049110FGENESH: predicted gene_9.257 protein. (762 aa)
BN2166_0037270Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (2243 aa)
BN2166_0052260Belongs to the cyclin family. (651 aa)
BN2166_0054980BY PROTMAP: gi|647394255|emb|CDR35483.1| RHTO0S01e00254g1_1 [Rhodosporidium toruloides]. (943 aa)
BN2166_0052760annotation not available (1447 aa)
BN2166_0057990Putative Serine/threonine protein kinase FSK. (750 aa)
BN2166_0057780annotation not available (296 aa)
BN2166_0058130FGENESH: predicted gene_11.309 protein. (141 aa)
BN2166_0068350annotation not available (1501 aa)
BN2166_0056310BY PROTMAP: gi|342320193|gb|EGU12135.1| Other/AUR protein kinase [Rhodotorula glutinis ATCC 204091]. (504 aa)
BN2166_0059410annotation not available (1662 aa)
BN2166_0065240Belongs to the cyclin family. (606 aa)
BN2166_0048770WD_REPEATS_REGION domain-containing protein. (1291 aa)
BN2166_0048920annotation not available (947 aa)
BN2166_0073750Structural maintenance of chromosomes protein. (1264 aa)
BN2166_0062410annotation not available (2117 aa)
BN2166_0067740annotation not available (172 aa)
BN2166_0051120RecF/RecN/SMC N terminal domain-domain containing protein. (1719 aa)
BN2166_0069340Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. (844 aa)
BN2166_0051320N terminus of Rad21 / Rec8 like protein-domain containing protein. (698 aa)
BN2166_0068730BY PROTMAP: gi|342318889|gb|EGU10845.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (695 aa)
BN2166_0067110Sister chromatid cohesion protein. (2042 aa)
BN2166_0069630Regulator of volume decrease after cellular swelling-domain containing protein. (269 aa)
BN2166_0070430Protein kinase-like domain-containing protein. (533 aa)
BN2166_0074190WD40 repeat-like protein. (348 aa)
BN2166_0074510Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1400 aa)
BN2166_0069970Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1162 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.