STRINGSTRING
BN2166_0055790 BN2166_0055790 BN2166_0058240 BN2166_0058240 BN2166_0058680 BN2166_0058680 BN2166_0061030 BN2166_0061030 BN2166_0061020 BN2166_0061020
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0055790Ribosomal protein L30, ferredoxin-like fold domain-containing protein. (243 aa)
BN2166_0058240Uncharacterized protein. (995 aa)
BN2166_0058680BY PROTMAP: gi|647398523|emb|CDR42540.1| RHTO0S07e00760g1_1 [Rhodosporidium toruloides]. (1073 aa)
BN2166_0061030BY PROTMAP: gi|342321152|gb|EGU13087.1| mRNA export factor elf1 [Rhodotorula glutinis ATCC 204091]. (152 aa)
BN2166_0061020P-loop containing nucleoside triphosphate hydrolase protein. (1117 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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