STRINGSTRING
BN2166_0002600 BN2166_0002600 BN2166_0005100 BN2166_0005100 BN2166_0007350 BN2166_0007350 BN2166_0011400 BN2166_0011400 BN2166_0017950 BN2166_0017950 BN2166_0022600 BN2166_0022600 BN2166_0027250 BN2166_0027250 BN2166_0021140 BN2166_0021140 BN2166_0025290 BN2166_0025290 BN2166_0037050 BN2166_0037050 BN2166_0032130 BN2166_0032130 BN2166_0032360 BN2166_0032360 BN2166_0019820 BN2166_0019820 BN2166_0035210 BN2166_0035210 BN2166_0047950 BN2166_0047950 BN2166_0039360 BN2166_0039360 BN2166_0029070 BN2166_0029070 BN2166_0045630 BN2166_0045630 BN2166_0044460 BN2166_0044460 BN2166_0032270 BN2166_0032270 BN2166_0051510 BN2166_0051510 BN2166_0064400 BN2166_0064400 BN2166_0055980 BN2166_0055980 BN2166_0060440 BN2166_0060440 BN2166_0063830 BN2166_0063830 BN2166_0065230 BN2166_0065230 BN2166_0068880 BN2166_0068880 BN2166_0073940 BN2166_0073940
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0002600annotation not available (1148 aa)
BN2166_0005100Belongs to the STXBP/unc-18/SEC1 family. (652 aa)
BN2166_0007350Uncharacterized protein. (746 aa)
BN2166_0011400Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. (1433 aa)
BN2166_0017950Vacuolar assembling/sorting protein VPS16. (956 aa)
BN2166_0022600Putative GTP-binding protein ypt1. (205 aa)
BN2166_0027250Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (324 aa)
BN2166_0021140FGENESH: predicted gene_3.565 protein. (1757 aa)
BN2166_0025290FGENESH: predicted gene_5.74 protein. (1104 aa)
BN2166_0037050Uncharacterized protein. (754 aa)
BN2166_0032130BY PROTMAP: gi|595441971|gb|EXX54114.1| Ypt7p [Rhizophagus irregularis DAOM 197198w]. (183 aa)
BN2166_0032360BY PROTMAP: gi|342319630|gb|EGU11577.1| Small Rab GTPase Rab7a [Rhodotorula glutinis ATCC 204091]. (447 aa)
BN2166_0019820Rab-GTPase-TBC domain-domain containing protein. (738 aa)
BN2166_0035210annotation not available (714 aa)
BN2166_0047950Pep3/Vps18/deep orange family-domain containing protein. (1140 aa)
BN2166_0039360annotation not available (635 aa)
BN2166_0029070Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. (452 aa)
BN2166_0045630annotation not available (1118 aa)
BN2166_0044460Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family. (1002 aa)
BN2166_0032270FGENESH: predicted gene_6.149 protein. (324 aa)
BN2166_0051510GDP dissociation inhibitor-domain containing protein. (595 aa)
BN2166_0064400BY PROTMAP: gi|342319556|gb|EGU11504.1| GTP-binding protein RAB5 [Rhodotorula glutinis ATCC 204091]. (211 aa)
BN2166_0055980annotation not available (197 aa)
BN2166_0060440P-loop containing nucleoside triphosphate hydrolase protein. (253 aa)
BN2166_0063830annotation not available (1545 aa)
BN2166_0065230Belongs to the STXBP/unc-18/SEC1 family. (936 aa)
BN2166_0068880FGENESH: predicted gene_15.169 protein. (195 aa)
BN2166_0073940annotation not available (866 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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