STRINGSTRING
BN2166_0031930 BN2166_0031930 BN2166_0005500 BN2166_0005500 BN2166_0008240 BN2166_0008240 BN2166_0013190 BN2166_0013190 BN2166_0021040 BN2166_0021040 BN2166_0029890 BN2166_0029890 BN2166_0014120 BN2166_0014120 BN2166_0014170 BN2166_0014170 BN2166_0034460 BN2166_0034460 BN2166_0040590 BN2166_0040590 BN2166_0026020 BN2166_0026020 BN2166_0042710 BN2166_0042710 BN2166_0048330 BN2166_0048330 BN2166_0060200 BN2166_0060200 BN2166_0064280 BN2166_0064280
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0031930GTP-binding protein, SEC4. (215 aa)
BN2166_0005500BY PROTMAP: gi|647396266|emb|CDR38290.1| RHTO0S03e07712g1_1 [Rhodosporidium toruloides]. (566 aa)
BN2166_0008240BY PROTMAP: gi|814541159|emb|CEQ41599.1| SPOSA6832_03328, partial [Sporidiobolus salmonicolor]. (772 aa)
BN2166_0013190annotation not available (388 aa)
BN2166_0021040Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family. (661 aa)
BN2166_0029890annotation not available (1472 aa)
BN2166_0014120Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family. (750 aa)
BN2166_0014170Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (792 aa)
BN2166_0034460annotation not available (852 aa)
BN2166_0040590Exocyst complex component Sec3-domain containing protein. (1164 aa)
BN2166_0026020BY PROTMAP: gi|814543428|emb|CEQ39121.1| SPOSA6832_00614, partial [Sporidiobolus salmonicolor]. (985 aa)
BN2166_0042710BY PROTMAP: gi|647396024|emb|CDR38046.1| RHTO0S03e02322g1_1 [Rhodosporidium toruloides]. (1205 aa)
BN2166_0048330Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. (1025 aa)
BN2166_0060200Exocyst complex component Sec10-domain containing protein. (1039 aa)
BN2166_0064280BY PROTMAP: gi|342319548|gb|EGU11496.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (875 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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