36 items (Rhodotorula toruloides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BN2166_0066280	BY PROTMAP: gi\|647400610\|emb\|CDR46241.1\| RHTO0S12e01926g1_1 [Rhodosporidium toruloides]; Belongs to the actin-binding proteins ADF family. (138 aa)
	BN2166_0009400	BY PROTMAP: gi\|342320066\|gb\|EGU12009.1\| Srp54 [Rhodotorula glutinis ATCC 204091]. (244 aa)
	BN2166_0012350	FGENESH: predicted gene_2.404 protein. (220 aa)
	BN2166_0012400	BY PROTMAP: gi\|647394720\|emb\|CDR35954.1\| RHTO0S01e10902g1_1 [Rhodosporidium toruloides]. (316 aa)
	BN2166_0006180	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]. (970 aa)
	BN2166_0009380	Fungal_trans domain-containing protein. (334 aa)
	BN2166_0009110	Uncharacterized protein. (132 aa)
	BN2166_0028750	FGENESH: predicted gene_5.420 protein. (557 aa)
	BN2166_0020060	FGENESH: predicted gene_3.457 protein. (580 aa)
	BN2166_0028890	BY PROTMAP: gi\|814540016\|emb\|CEQ42646.1\| SPOSA6832_04462 [Sporidiobolus salmonicolor]. (221 aa)
	BN2166_0013120	WD40-repeat-containing domain protein. (856 aa)
	BN2166_0016670	CAMK/CAMKL/PASK protein kinase. (547 aa)
	BN2166_0017570	Fungal specific transcription factor domain-domain containing protein. (663 aa)
	BN2166_0035540	annotation not available (1033 aa)
	BN2166_0019520	Ribosomal protein subunit Mrp10. (137 aa)
	BN2166_0036180	Armadillo/beta-catenin/plakoglobin. (211 aa)
	BN2166_0041040	HSF-type DNA-binding-domain containing protein. (711 aa)
	BN2166_0024020	BY PROTMAP: gi\|342319834\|gb\|EGU11780.1\| LigA [Rhodotorula glutinis ATCC 204091]. (876 aa)
	BN2166_0027370	BHLH domain-containing protein. (740 aa)
	BN2166_0031120	BY PROTMAP: gi\|342319574\|gb\|EGU11521.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (600 aa)
	BN2166_0032320	Uncharacterized protein. (156 aa)
	BN2166_0060300	annotation not available (803 aa)
	BN2166_0050630	BY PROTMAP: gi\|342321274\|gb\|EGU13208.1\| Membrane protein [Rhodotorula glutinis ATCC 204091]. (1215 aa)
	BN2166_0052630	FGENESH: predicted gene_10.100 protein. (730 aa)
	BN2166_0062150	annotation not available (376 aa)
	BN2166_0063150	annotation not available (791 aa)
	BN2166_0061840	Uncharacterized protein. (306 aa)
	BN2166_0044720	Belongs to the 14-3-3 family. (233 aa)
	BN2166_0060230	BY PROTMAP: gi\|342321175\|gb\|EGU13110.1\| CMGC/GSK protein kinase [Rhodotorula glutinis ATCC 204091]. (1508 aa)
	BN2166_0060110	annotation not available (524 aa)
	BN2166_0062980	Mitogen-activated protein kinase. (344 aa)
	BN2166_0063680	Uncharacterized protein. (340 aa)
	BN2166_0049870	BY PROTMAP: gi\|634350156\|gb\|KDE05429.1\| 14-3-3-like protein [Microbotryum violaceum p1A1 Lamole]; Belongs to the 14-3-3 family. (266 aa)
	BN2166_0071740	Fungal specific transcription factor domain-domain containing protein. (1316 aa)
	BN2166_0070680	BY PROTMAP: gi\|342320304\|gb\|EGU12245.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (580 aa)
	BN2166_0063970	annotation not available (694 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0006180	BN2166_0016670	A0A0K3C803	A0A0K3CF44	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	CAMK/CAMKL/PASK protein kinase.	0.412
BN2166_0006180	BN2166_0019520	A0A0K3C803	A0A0K3CFW3	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	Ribosomal protein subunit Mrp10.	0.536
BN2166_0006180	BN2166_0020060	A0A0K3C803	A0A0K3CC68	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	FGENESH: predicted gene_3.457 protein.	0.412
BN2166_0006180	BN2166_0044720	A0A0K3C803	A0A0K3CN55	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	Belongs to the 14-3-3 family.	0.518
BN2166_0006180	BN2166_0049870	A0A0K3C803	A0A0K3CPL0	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	BY PROTMAP: gi\|634350156\|gb\|KDE05429.1\| 14-3-3-like protein [Microbotryum violaceum p1A1 Lamole]; Belongs to the 14-3-3 family.	0.518
BN2166_0006180	BN2166_0050630	A0A0K3C803	A0A0K3CKI4	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	BY PROTMAP: gi\|342321274\|gb\|EGU13208.1\| Membrane protein [Rhodotorula glutinis ATCC 204091].	0.435
BN2166_0006180	BN2166_0060110	A0A0K3C803	A0A0K3CNT7	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	annotation not available	0.412
BN2166_0006180	BN2166_0060230	A0A0K3C803	A0A0K3CN92	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	BY PROTMAP: gi\|342321175\|gb\|EGU13110.1\| CMGC/GSK protein kinase [Rhodotorula glutinis ATCC 204091].	0.412
BN2166_0006180	BN2166_0062980	A0A0K3C803	A0A0K3CP19	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	Mitogen-activated protein kinase.	0.640
BN2166_0006180	BN2166_0063150	A0A0K3C803	A0A0K3CLC8	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	annotation not available	0.601
BN2166_0006180	BN2166_0063970	A0A0K3C803	A0A0K3CTJ1	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	annotation not available	0.496
BN2166_0006180	BN2166_0066280	A0A0K3C803	A0A061BGV8	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	BY PROTMAP: gi\|647400610\|emb\|CDR46241.1\| RHTO0S12e01926g1_1 [Rhodosporidium toruloides]; Belongs to the actin-binding proteins ADF family.	0.600
BN2166_0009110	BN2166_0013120	A0A0K3C961	A0A0K3CE46	Uncharacterized protein.	WD40-repeat-containing domain protein.	0.433
BN2166_0009110	BN2166_0028890	A0A0K3C961	A0A0K3CDN2	Uncharacterized protein.	BY PROTMAP: gi\|814540016\|emb\|CEQ42646.1\| SPOSA6832_04462 [Sporidiobolus salmonicolor].	0.946
BN2166_0009110	BN2166_0036180	A0A0K3C961	A0A0K3CGN8	Uncharacterized protein.	Armadillo/beta-catenin/plakoglobin.	0.946
BN2166_0009110	BN2166_0061840	A0A0K3C961	A0A0K3CMX7	Uncharacterized protein.	Uncharacterized protein.	0.846
BN2166_0009380	BN2166_0013120	A0A0K3C8U7	A0A0K3CE46	Fungal_trans domain-containing protein.	WD40-repeat-containing domain protein.	0.403
BN2166_0009380	BN2166_0044720	A0A0K3C8U7	A0A0K3CN55	Fungal_trans domain-containing protein.	Belongs to the 14-3-3 family.	0.435
BN2166_0009380	BN2166_0049870	A0A0K3C8U7	A0A0K3CPL0	Fungal_trans domain-containing protein.	BY PROTMAP: gi\|634350156\|gb\|KDE05429.1\| 14-3-3-like protein [Microbotryum violaceum p1A1 Lamole]; Belongs to the 14-3-3 family.	0.435
BN2166_0009380	BN2166_0060110	A0A0K3C8U7	A0A0K3CNT7	Fungal_trans domain-containing protein.	annotation not available	0.555

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