STRINGSTRING
BN2166_0002340 BN2166_0002340 BN2166_0011950 BN2166_0011950 BN2166_0006090 BN2166_0006090 BN2166_0013030 BN2166_0013030 BN2166_0017210 BN2166_0017210 BN2166_0024630 BN2166_0024630 BN2166_0031190 BN2166_0031190 BN2166_0031510 BN2166_0031510 BN2166_0033980 BN2166_0033980 BN2166_0026970 BN2166_0026970 BN2166_0043810 BN2166_0043810 BN2166_0049190 BN2166_0049190 BN2166_0046630 BN2166_0046630 BN2166_0049940 BN2166_0049940 BN2166_0055190 BN2166_0055190 BN2166_0050610 BN2166_0050610 BN2166_0046520 BN2166_0046520 BN2166_0067860 BN2166_0067860
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0002340Uridine kinase; Belongs to the uridine kinase family. (551 aa)
BN2166_0011950FGENESH: predicted gene_2.364 protein. (368 aa)
BN2166_0006090annotation not available (547 aa)
BN2166_0013030annotation not available (216 aa)
BN2166_0017210annotation not available (646 aa)
BN2166_0024630Inosine/uridine-preferring nucleoside hydrolase domain-containing protein. (448 aa)
BN2166_0031190BY PROTMAP: gi|472585042|gb|EMS22608.1| uridine phosphorylase [Rhodosporidium toruloides NP11]. (244 aa)
BN2166_0031510BY PROTMAP: gi|342319597|gb|EGU11544.1| Cytosine deaminase [Rhodotorula glutinis ATCC 204091]. (165 aa)
BN2166_0033980annotation not available (712 aa)
BN2166_0026970Cytidine deaminase-like protein. (252 aa)
BN2166_0043810Molybdopterin binding Aldehyde oxidase/xanthine dehydrogenase. (1500 aa)
BN2166_0049190annotation not available (676 aa)
BN2166_0046630Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (173 aa)
BN2166_0049940BY PROTMAP: gi|342321305|gb|EGU13239.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1681 aa)
BN2166_0055190annotation not available (483 aa)
BN2166_0050610Adenine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenine deaminase type 2 subfamily. (877 aa)
BN2166_0046520annotation not available (372 aa)
BN2166_0067860Uncharacterized protein. (696 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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