STRINGSTRING
BN2166_0035360 BN2166_0035360 BN2166_0047370 BN2166_0047370 BN2166_0027430 BN2166_0027430 BN2166_0031300 BN2166_0031300 BN2166_0018380 BN2166_0018380 BN2166_0012330 BN2166_0012330 BN2166_0056660 BN2166_0056660 BN2166_0029560 BN2166_0029560 BN2166_0040360 BN2166_0040360
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0035360SNF2 family N-terminal domain-domain containing protein. (1010 aa)
BN2166_0047370annotation not available (743 aa)
BN2166_0027430BY PROTMAP: gi|342320929|gb|EGU12867.1| Transcription factor [Rhodotorula glutinis ATCC 204091]. (689 aa)
BN2166_0031300Belongs to the actin family. (794 aa)
BN2166_0018380BY PROTMAP: gi|342319877|gb|EGU11822.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1278 aa)
BN2166_0012330FGENESH: predicted gene_2.402 protein. (772 aa)
BN2166_0056660Histone H2A; Belongs to the histone H2A family. (159 aa)
BN2166_0029560annotation not available (1487 aa)
BN2166_0040360annotation not available (745 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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