11 items (Rhodotorula toruloides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

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Your Input:
	BN2166_0068930	Uncharacterized protein. (1118 aa)
	BN2166_0005200	annotation not available (1304 aa)
	BN2166_0008900	XPC-binding domain-domain containing protein. (403 aa)
	BN2166_0009130	Restriction endonuclease type II-like protein. (332 aa)
	BN2166_0026990	annotation not available (1030 aa)
	BN2166_0011870	annotation not available (1800 aa)
	BN2166_0032380	annotation not available (641 aa)
	BN2166_0043930	BY PROTMAP: gi\|342321555\|gb\|EGU13488.1\| Hydrophilic protein [Rhodotorula glutinis ATCC 204091]. (370 aa)
	BN2166_0056710	annotation not available (427 aa)
	BN2166_0067080	annotation not available (871 aa)
	BN2166_0054770	ERCC4 domain-containing protein. (1060 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0005200	BN2166_0008900	A0A0K3C4T5	A0A0K3C5Q2	annotation not available	XPC-binding domain-domain containing protein.	0.803
BN2166_0005200	BN2166_0009130	A0A0K3C4T5	A0A0K3C8T5	annotation not available	Restriction endonuclease type II-like protein.	0.881
BN2166_0005200	BN2166_0011870	A0A0K3C4T5	A0A0K3CDU2	annotation not available	annotation not available	0.983
BN2166_0005200	BN2166_0026990	A0A0K3C4T5	A0A0K3CD67	annotation not available	annotation not available	0.525
BN2166_0005200	BN2166_0032380	A0A0K3C4T5	A0A0K3CFN6	annotation not available	annotation not available	0.538
BN2166_0005200	BN2166_0043930	A0A0K3C4T5	A0A0K3CIR0	annotation not available	BY PROTMAP: gi\|342321555\|gb\|EGU13488.1\| Hydrophilic protein [Rhodotorula glutinis ATCC 204091].	0.888
BN2166_0005200	BN2166_0054770	A0A0K3C4T5	A0A0K3CQY3	annotation not available	ERCC4 domain-containing protein.	0.901
BN2166_0005200	BN2166_0067080	A0A0K3C4T5	A0A0K3CQ89	annotation not available	annotation not available	0.974
BN2166_0005200	BN2166_0068930	A0A0K3C4T5	A0A0K3CQP8	annotation not available	Uncharacterized protein.	0.830
BN2166_0008900	BN2166_0005200	A0A0K3C5Q2	A0A0K3C4T5	XPC-binding domain-domain containing protein.	annotation not available	0.803
BN2166_0008900	BN2166_0009130	A0A0K3C5Q2	A0A0K3C8T5	XPC-binding domain-domain containing protein.	Restriction endonuclease type II-like protein.	0.799
BN2166_0008900	BN2166_0011870	A0A0K3C5Q2	A0A0K3CDU2	XPC-binding domain-domain containing protein.	annotation not available	0.859
BN2166_0008900	BN2166_0026990	A0A0K3C5Q2	A0A0K3CD67	XPC-binding domain-domain containing protein.	annotation not available	0.598
BN2166_0008900	BN2166_0032380	A0A0K3C5Q2	A0A0K3CFN6	XPC-binding domain-domain containing protein.	annotation not available	0.755
BN2166_0008900	BN2166_0043930	A0A0K3C5Q2	A0A0K3CIR0	XPC-binding domain-domain containing protein.	BY PROTMAP: gi\|342321555\|gb\|EGU13488.1\| Hydrophilic protein [Rhodotorula glutinis ATCC 204091].	0.896
BN2166_0008900	BN2166_0054770	A0A0K3C5Q2	A0A0K3CQY3	XPC-binding domain-domain containing protein.	ERCC4 domain-containing protein.	0.706
BN2166_0008900	BN2166_0067080	A0A0K3C5Q2	A0A0K3CQ89	XPC-binding domain-domain containing protein.	annotation not available	0.838
BN2166_0008900	BN2166_0068930	A0A0K3C5Q2	A0A0K3CQP8	XPC-binding domain-domain containing protein.	Uncharacterized protein.	0.996
BN2166_0009130	BN2166_0005200	A0A0K3C8T5	A0A0K3C4T5	Restriction endonuclease type II-like protein.	annotation not available	0.881
BN2166_0009130	BN2166_0008900	A0A0K3C8T5	A0A0K3C5Q2	Restriction endonuclease type II-like protein.	XPC-binding domain-domain containing protein.	0.799

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