STRINGSTRING
BN2166_0032590 BN2166_0032590 BN2166_0036360 BN2166_0036360 BN2166_0038180 BN2166_0038180 BN2166_0048480 BN2166_0048480 BN2166_0058750 BN2166_0058750 BN2166_0052580 BN2166_0052580 BN2166_0054430 BN2166_0054430 BN2166_0040220 BN2166_0040220 BN2166_0056930 BN2166_0056930 BN2166_0047470 BN2166_0047470 BN2166_0048920 BN2166_0048920 BN2166_0062410 BN2166_0062410 BN2166_0065130 BN2166_0065130 BN2166_0066210 BN2166_0066210 BN2166_0070760 BN2166_0070760 BN2166_0059220 BN2166_0059220 BN2166_0062070 BN2166_0062070 BN2166_0034680 BN2166_0034680 BN2166_0022420 BN2166_0022420 BN2166_0028730 BN2166_0028730 BN2166_0027160 BN2166_0027160 BN2166_0008270 BN2166_0008270 BN2166_0033000 BN2166_0033000 BN2166_0031800 BN2166_0031800 BN2166_0019510 BN2166_0019510 BN2166_0004070 BN2166_0004070 BN2166_0015510 BN2166_0015510 BN2166_0017690 BN2166_0017690 BN2166_0023450 BN2166_0023450 BN2166_0007910 BN2166_0007910 BN2166_0010090 BN2166_0010090 BN2166_0007690 BN2166_0007690 BN2166_0004980 BN2166_0004980 BN2166_0004690 BN2166_0004690 BN2166_0001790 BN2166_0001790 BN2166_0005450 BN2166_0005450 BN2166_0004550 BN2166_0004550 BN2166_0001100 BN2166_0001100 BN2166_0054080 BN2166_0054080 BN2166_0007280 BN2166_0007280
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0032590BY PROTMAP: gi|647400037|emb|CDR45136.1| RHTO0S10e05402g1_1 [Rhodosporidium toruloides]. (3819 aa)
BN2166_0036360annotation not available (375 aa)
BN2166_0038180E3 ubiquitin-protein ligase. (820 aa)
BN2166_0048480annotation not available (948 aa)
BN2166_0058750BY PROTMAP: gi|342320584|gb|EGU12524.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (449 aa)
BN2166_0052580RBR-type E3 ubiquitin transferase. (312 aa)
BN2166_0054430UBC-like protein. (188 aa)
BN2166_0040220BY PROTMAP: gi|814542956|emb|CEQ39987.1| SPOSA6832_01580 [Sporidiobolus salmonicolor]; Belongs to the ubiquitin-conjugating enzyme family. (145 aa)
BN2166_0056930annotation not available (230 aa)
BN2166_0047470RBR-type E3 ubiquitin transferase. (885 aa)
BN2166_0048920annotation not available (947 aa)
BN2166_0062410annotation not available (2117 aa)
BN2166_0065130annotation not available (1185 aa)
BN2166_0066210BY PROTMAP: gi|647400604|emb|CDR46228.1| RHTO0S12e01794g1_1 [Rhodosporidium toruloides]. (1112 aa)
BN2166_0070760Uncharacterized protein. (1111 aa)
BN2166_0059220UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (123 aa)
BN2166_0062070Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family. (170 aa)
BN2166_0034680annotation not available (1141 aa)
BN2166_0022420annotation not available (768 aa)
BN2166_0028730Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (182 aa)
BN2166_0027160Belongs to the cullin family. (746 aa)
BN2166_0008270annotation not available (138 aa)
BN2166_0033000BY PROTMAP: gi|647399992|emb|CDR45043.1| RHTO0S10e04456g1_1 [Rhodosporidium toruloides]. (746 aa)
BN2166_0031800FGENESH: predicted gene_6.102 protein. (271 aa)
BN2166_0019510ANAPC5 domain-containing protein. (680 aa)
BN2166_0004070annotation not available (571 aa)
BN2166_0015510Belongs to the ubiquitin-conjugating enzyme family. (187 aa)
BN2166_0017690RBR-type E3 ubiquitin transferase. (584 aa)
BN2166_0023450Belongs to the ubiquitin-conjugating enzyme family. (184 aa)
BN2166_0007910FGENESH: predicted gene_1.791 protein. (2059 aa)
BN2166_0010090Belongs to the ubiquitin-conjugating enzyme family. (111 aa)
BN2166_0007690FGENESH: predicted gene_1.769 protein. (1389 aa)
BN2166_0004980Uncharacterized protein. (740 aa)
BN2166_0004690RBR-type E3 ubiquitin transferase. (325 aa)
BN2166_0001790DWNN domain-domain containing protein. (680 aa)
BN2166_0005450RING-type domain-containing protein. (946 aa)
BN2166_0004550Ubiquitin carrier protein. (184 aa)
BN2166_0001100annotation not available (275 aa)
BN2166_0054080Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
BN2166_0007280Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family. (171 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.