19 items (Rhodotorula toruloides) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

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gene fusions

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Your Input:
	BN2166_0064920	AAA_23 domain-containing protein. (197 aa)
	BN2166_0006160	annotation not available (269 aa)
	BN2166_0028350	Structural maintenance of chromosomes protein. (1243 aa)
	BN2166_0004570	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (345 aa)
	BN2166_0008170	Checkpoint protein; Belongs to the HUS1 family. (295 aa)
	BN2166_0011020	FGENESH: predicted gene_2.271 protein. (1103 aa)
	BN2166_0039050	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (620 aa)
	BN2166_0039200	annotation not available (929 aa)
	BN2166_0032090	BY PROTMAP: gi\|647400090\|emb\|CDR45195.1\| RHTO0S10e06590g1_1 [Rhodosporidium toruloides]. (965 aa)
	BN2166_0023620	BY PROTMAP: gi\|342319821\|gb\|EGU11767.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1641 aa)
	BN2166_0040560	RING-type domain-containing protein. (318 aa)
	BN2166_0047310	Rad9-domain containing protein. (537 aa)
	BN2166_0052490	Small ubiquitin-related modifier. (102 aa)
	BN2166_0049110	FGENESH: predicted gene_9.257 protein. (762 aa)
	BN2166_0051480	FGENESH: predicted gene_9.494 protein. (127 aa)
	BN2166_0064900	Uncharacterized protein. (189 aa)
	BN2166_0046420	Belongs to the RecA family. (319 aa)
	BN2166_0051320	N terminus of Rad21 / Rec8 like protein-domain containing protein. (698 aa)
	BN2166_0064910	FGENESH: predicted gene_14.41 protein. (914 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0004570	BN2166_0006160	A0A0K3CBS7	A0A0K3C8D6	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	annotation not available	0.676
BN2166_0004570	BN2166_0008170	A0A0K3CBS7	A0A0K3CCR3	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	Checkpoint protein; Belongs to the HUS1 family.	0.685
BN2166_0004570	BN2166_0011020	A0A0K3CBS7	A0A0K3CDI1	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	FGENESH: predicted gene_2.271 protein.	0.524
BN2166_0004570	BN2166_0023620	A0A0K3CBS7	A0A0K3CH38	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	BY PROTMAP: gi\|342319821\|gb\|EGU11767.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091].	0.847
BN2166_0004570	BN2166_0028350	A0A0K3CBS7	A0A0K3CB44	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	Structural maintenance of chromosomes protein.	0.559
BN2166_0004570	BN2166_0039050	A0A0K3CBS7	A0A0K3CE99	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.988
BN2166_0004570	BN2166_0039200	A0A0K3CBS7	A0A0K3CEB2	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	annotation not available	0.524
BN2166_0004570	BN2166_0046420	A0A0K3CBS7	A0A0K3CNP5	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	Belongs to the RecA family.	0.972
BN2166_0004570	BN2166_0047310	A0A0K3CBS7	A0A0K3CKB4	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	Rad9-domain containing protein.	0.839
BN2166_0004570	BN2166_0051320	A0A0K3CBS7	A0A0K3CQ30	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	N terminus of Rad21 / Rec8 like protein-domain containing protein.	0.505
BN2166_0004570	BN2166_0051480	A0A0K3CBS7	A0A0K3CKT7	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	FGENESH: predicted gene_9.494 protein.	0.631
BN2166_0004570	BN2166_0052490	A0A0K3CBS7	A0A0K3CKC9	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	Small ubiquitin-related modifier.	0.631
BN2166_0004570	BN2166_0064900	A0A0K3CBS7	A0A0K3CLU5	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	Uncharacterized protein.	0.777
BN2166_0004570	BN2166_0064910	A0A0K3CBS7	A0A0K3CQ74	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	FGENESH: predicted gene_14.41 protein.	0.777
BN2166_0004570	BN2166_0064920	A0A0K3CBS7	A0A0K3CTS9	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	AAA_23 domain-containing protein.	0.777
BN2166_0006160	BN2166_0004570	A0A0K3C8D6	A0A0K3CBS7	annotation not available	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	0.676
BN2166_0006160	BN2166_0046420	A0A0K3C8D6	A0A0K3CNP5	annotation not available	Belongs to the RecA family.	0.672
BN2166_0008170	BN2166_0004570	A0A0K3CCR3	A0A0K3CBS7	Checkpoint protein; Belongs to the HUS1 family.	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	0.685
BN2166_0008170	BN2166_0023620	A0A0K3CCR3	A0A0K3CH38	Checkpoint protein; Belongs to the HUS1 family.	BY PROTMAP: gi\|342319821\|gb\|EGU11767.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091].	0.996
BN2166_0008170	BN2166_0039050	A0A0K3CCR3	A0A0K3CE99	Checkpoint protein; Belongs to the HUS1 family.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.890

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