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BN2166_0019460 BN2166_0019460 BN2166_0012400 BN2166_0012400 BN2166_0036000 BN2166_0036000 BN2166_0013070 BN2166_0013070 BN2166_0027430 BN2166_0027430 BN2166_0041040 BN2166_0041040 BN2166_0027370 BN2166_0027370 BN2166_0057490 BN2166_0057490 BN2166_0021800 BN2166_0021800
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0019460BY PROTMAP: gi|342320109|gb|EGU12052.1| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]. (639 aa)
BN2166_0012400BY PROTMAP: gi|647394720|emb|CDR35954.1| RHTO0S01e10902g1_1 [Rhodosporidium toruloides]. (316 aa)
BN2166_0036000annotation not available (1441 aa)
BN2166_0013070BY PROTMAP: gi|647394641|emb|CDR35874.1| RHTO0S01e09142g1_1 [Rhodosporidium toruloides]. (1259 aa)
BN2166_0027430BY PROTMAP: gi|342320929|gb|EGU12867.1| Transcription factor [Rhodotorula glutinis ATCC 204091]. (689 aa)
BN2166_0041040HSF-type DNA-binding-domain containing protein. (711 aa)
BN2166_0027370BHLH domain-containing protein. (740 aa)
BN2166_0057490annotation not available (416 aa)
BN2166_0021800Nuclear transcription factor Y subunit B-1. (196 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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