Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BN2166_0002310 | BN2166_0008450 | A0A0K3C7E6 | A0A0K3C5L7 | DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. | BY PROTMAP: gi|636745340|gb|AIA21643.1| KU70 [Rhodosporidium toruloides]. | 0.777 |
| BN2166_0002310 | BN2166_0028340 | A0A0K3C7E6 | A0A0K3CDI4 | DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. | annotation not available | 0.599 |
| BN2166_0002310 | BN2166_0035640 | A0A0K3C7E6 | A0A0K3CFG4 | DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. | annotation not available | 0.434 |
| BN2166_0002310 | BN2166_0039050 | A0A0K3C7E6 | A0A0K3CE99 | DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.702 |
| BN2166_0002310 | BN2166_0054480 | A0A0K3C7E6 | A0A0K3CLK3 | DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. | annotation not available | 0.653 |
| BN2166_0002310 | KU80 | A0A0K3C7E6 | A0A059XCF6 | DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. | BY PROTMAP: gi|636745342|gb|AIA21644.1| KU80 [Rhodosporidium toruloides]. | 0.698 |
| BN2166_0003640 | BN2166_0008900 | A0A0K3C6K6 | A0A0K3C5Q2 | annotation not available | XPC-binding domain-domain containing protein. | 0.612 |
| BN2166_0003640 | BN2166_0009130 | A0A0K3C6K6 | A0A0K3C8T5 | annotation not available | Restriction endonuclease type II-like protein. | 0.501 |
| BN2166_0003640 | BN2166_0016830 | A0A0K3C6K6 | A0A0K3CB16 | annotation not available | DNA glycosylase. | 0.459 |
| BN2166_0003640 | BN2166_0035640 | A0A0K3C6K6 | A0A0K3CFG4 | annotation not available | annotation not available | 0.890 |
| BN2166_0003640 | BN2166_0036510 | A0A0K3C6K6 | A0A0K3CGZ6 | annotation not available | annotation not available | 0.602 |
| BN2166_0003640 | BN2166_0037810 | A0A0K3C6K6 | A0A0K3CHA7 | annotation not available | BY PROTMAP: gi|342320515|gb|EGU12455.1| glycosylase/lyase [Rhodotorula glutinis ATCC 204091]. | 0.459 |
| BN2166_0003640 | BN2166_0039050 | A0A0K3C6K6 | A0A0K3CE99 | annotation not available | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.675 |
| BN2166_0003640 | BN2166_0043930 | A0A0K3C6K6 | A0A0K3CIR0 | annotation not available | BY PROTMAP: gi|342321555|gb|EGU13488.1| Hydrophilic protein [Rhodotorula glutinis ATCC 204091]. | 0.768 |
| BN2166_0003640 | BN2166_0047540 | A0A0K3C6K6 | A0A0K3CIX9 | annotation not available | Uncharacterized protein. | 0.979 |
| BN2166_0003640 | BN2166_0054770 | A0A0K3C6K6 | A0A0K3CQY3 | annotation not available | ERCC4 domain-containing protein. | 0.721 |
| BN2166_0003640 | BN2166_0067080 | A0A0K3C6K6 | A0A0K3CQ89 | annotation not available | annotation not available | 0.604 |
| BN2166_0008450 | BN2166_0002310 | A0A0K3C5L7 | A0A0K3C7E6 | BY PROTMAP: gi|636745340|gb|AIA21643.1| KU70 [Rhodosporidium toruloides]. | DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. | 0.777 |
| BN2166_0008450 | BN2166_0009130 | A0A0K3C5L7 | A0A0K3C8T5 | BY PROTMAP: gi|636745340|gb|AIA21643.1| KU70 [Rhodosporidium toruloides]. | Restriction endonuclease type II-like protein. | 0.530 |
| BN2166_0008450 | BN2166_0027720 | A0A0K3C5L7 | A0A0K3CI70 | BY PROTMAP: gi|636745340|gb|AIA21643.1| KU70 [Rhodosporidium toruloides]. | BY PROTMAP: gi|647399037|emb|CDR43407.1| RHTO0S08e01508g1_1 [Rhodosporidium toruloides]. | 0.539 |
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