11 items (Rhodotorula toruloides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BN2166_0007300	Protein kinase-like domain-containing protein. (449 aa)
	BN2166_0008850	FGENESH: predicted gene_2.54 protein. (1060 aa)
	BN2166_0009250	Pkinase-domain-containing protein. (429 aa)
	BN2166_0010940	annotation not available (1933 aa)
	BN2166_0018290	Protein kinase-like domain-containing protein; Belongs to the protein kinase superfamily. (431 aa)
	BN2166_0045430	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (328 aa)
	BN2166_0057400	annotation not available (1157 aa)
	BN2166_0046210	Belongs to the protein kinase superfamily. (354 aa)
	BN2166_0032870	annotation not available (831 aa)
	BN2166_0065380	BY PROTMAP: gi\|342319026\|gb\|EGU10978.1\| CMGC/CDK protein kinase [Rhodotorula glutinis ATCC 204091]. (409 aa)
	BN2166_0074240	BY PROTMAP: gi\|647401048\|emb\|CDR46990.1\| RHTO0S13e04478g1_1 [Rhodosporidium toruloides]; Belongs to the protein kinase superfamily. (294 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0007300	BN2166_0009250	A0A0K3C5D1	A0A0K3C5S3	Protein kinase-like domain-containing protein.	Pkinase-domain-containing protein.	0.622
BN2166_0008850	BN2166_0018290	A0A0K3C5P9	A0A0K3CAQ9	FGENESH: predicted gene_2.54 protein.	Protein kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	0.415
BN2166_0008850	BN2166_0046210	A0A0K3C5P9	A0A0K3CJR4	FGENESH: predicted gene_2.54 protein.	Belongs to the protein kinase superfamily.	0.793
BN2166_0008850	BN2166_0057400	A0A0K3C5P9	A0A0K3CJM9	FGENESH: predicted gene_2.54 protein.	annotation not available	0.747
BN2166_0008850	BN2166_0065380	A0A0K3C5P9	A0A0K3CPQ3	FGENESH: predicted gene_2.54 protein.	BY PROTMAP: gi\|342319026\|gb\|EGU10978.1\| CMGC/CDK protein kinase [Rhodotorula glutinis ATCC 204091].	0.792
BN2166_0009250	BN2166_0007300	A0A0K3C5S3	A0A0K3C5D1	Pkinase-domain-containing protein.	Protein kinase-like domain-containing protein.	0.622
BN2166_0009250	BN2166_0010940	A0A0K3C5S3	A0A0K3C8N6	Pkinase-domain-containing protein.	annotation not available	0.560
BN2166_0009250	BN2166_0018290	A0A0K3C5S3	A0A0K3CAQ9	Pkinase-domain-containing protein.	Protein kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	0.674
BN2166_0009250	BN2166_0032870	A0A0K3C5S3	A0A0K3CJS5	Pkinase-domain-containing protein.	annotation not available	0.560
BN2166_0009250	BN2166_0045430	A0A0K3C5S3	A0A0K3CJ54	Pkinase-domain-containing protein.	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.	0.674
BN2166_0009250	BN2166_0074240	A0A0K3C5S3	A0A0K3CRD2	Pkinase-domain-containing protein.	BY PROTMAP: gi\|647401048\|emb\|CDR46990.1\| RHTO0S13e04478g1_1 [Rhodosporidium toruloides]; Belongs to the protein kinase superfamily.	0.666
BN2166_0010940	BN2166_0009250	A0A0K3C8N6	A0A0K3C5S3	annotation not available	Pkinase-domain-containing protein.	0.560
BN2166_0018290	BN2166_0008850	A0A0K3CAQ9	A0A0K3C5P9	Protein kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	FGENESH: predicted gene_2.54 protein.	0.415
BN2166_0018290	BN2166_0009250	A0A0K3CAQ9	A0A0K3C5S3	Protein kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	Pkinase-domain-containing protein.	0.674
BN2166_0018290	BN2166_0046210	A0A0K3CAQ9	A0A0K3CJR4	Protein kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	Belongs to the protein kinase superfamily.	0.829
BN2166_0018290	BN2166_0057400	A0A0K3CAQ9	A0A0K3CJM9	Protein kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	annotation not available	0.406
BN2166_0018290	BN2166_0065380	A0A0K3CAQ9	A0A0K3CPQ3	Protein kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	BY PROTMAP: gi\|342319026\|gb\|EGU10978.1\| CMGC/CDK protein kinase [Rhodotorula glutinis ATCC 204091].	0.849
BN2166_0032870	BN2166_0009250	A0A0K3CJS5	A0A0K3C5S3	annotation not available	Pkinase-domain-containing protein.	0.560
BN2166_0045430	BN2166_0009250	A0A0K3CJ54	A0A0K3C5S3	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.	Pkinase-domain-containing protein.	0.674
BN2166_0045430	BN2166_0046210	A0A0K3CJ54	A0A0K3CJR4	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.	Belongs to the protein kinase superfamily.	0.878

page 1 of 2

Server load: low (18%) [HD]

Permalink

Network

Cooccurrence

Experiments

Neighborhood

Databases

Fusion

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About