STRINGSTRING
BN2166_0031010 BN2166_0031010 BN2166_0042650 BN2166_0042650 BN2166_0030660 BN2166_0030660 BN2166_0030460 BN2166_0030460 BN2166_0041650 BN2166_0041650 BN2166_0015970 BN2166_0015970 BN2166_0028160 BN2166_0028160 BN2166_0028130 BN2166_0028130 BN2166_0027730 BN2166_0027730 BN2166_0039050 BN2166_0039050 BN2166_0013720 BN2166_0013720 BN2166_0026010 BN2166_0026010 BN2166_0011870 BN2166_0011870 BN2166_0028340 BN2166_0028340 BN2166_0025130 BN2166_0025130 BN2166_0010270 BN2166_0010270 BN2166_0035600 BN2166_0035600 BN2166_0026990 BN2166_0026990 BN2166_0009520 BN2166_0009520 BN2166_0022560 BN2166_0022560 BN2166_0008370 BN2166_0008370 BN2166_0008270 BN2166_0008270 BN2166_0008170 BN2166_0008170 BN2166_0007270 BN2166_0007270 BN2166_0021260 BN2166_0021260 BN2166_0006320 BN2166_0006320 BN2166_0023890 BN2166_0023890 BN2166_0023090 BN2166_0023090 BN2166_0019410 BN2166_0019410 BN2166_0022640 BN2166_0022640 BN2166_0019260 BN2166_0019260 BN2166_0031250 BN2166_0031250 BN2166_0022240 BN2166_0022240 BN2166_0004570 BN2166_0004570 BN2166_0004420 BN2166_0004420 BN2166_0004120 BN2166_0004120 BN2166_0003470 BN2166_0003470 BN2166_0018230 BN2166_0018230 BN2166_0020340 BN2166_0020340 BN2166_0002820 BN2166_0002820 BN2166_0020240 BN2166_0020240 BN2166_0017230 BN2166_0017230 BN2166_0017180 BN2166_0017180 BN2166_0028300 BN2166_0028300 BN2166_0028100 BN2166_0028100 BN2166_0016830 BN2166_0016830 BN2166_0016730 BN2166_0016730 BN2166_0018540 BN2166_0018540 BN2166_0015980 BN2166_0015980 BN2166_0026100 BN2166_0026100 BN2166_0016890 BN2166_0016890 BN2166_0016440 BN2166_0016440 BN2166_0025450 BN2166_0025450 BN2166_0014180 BN2166_0014180 BN2166_0015840 BN2166_0015840 BN2166_0013580 BN2166_0013580 BN2166_0023950 BN2166_0023950 BN2166_0010510 BN2166_0010510 BN2166_0010060 BN2166_0010060 BN2166_0011180 BN2166_0011180 BN2166_0013540 BN2166_0013540 BN2166_0010430 BN2166_0010430 BN2166_0012140 BN2166_0012140 BN2166_0020800 BN2166_0020800 BN2166_0009230 BN2166_0009230 BN2166_0009130 BN2166_0009130 BN2166_0011190 BN2166_0011190 BN2166_0010040 BN2166_0010040 BN2166_0009540 BN2166_0009540 BN2166_0004360 BN2166_0004360 BN2166_0007690 BN2166_0007690 BN2166_0006890 BN2166_0006890 BN2166_0015600 BN2166_0015600 BN2166_0002310 BN2166_0002310 BN2166_0002260 BN2166_0002260 BN2166_0013500 BN2166_0013500 BN2166_0012900 BN2166_0012900 BN2166_0012700 BN2166_0012700 PIF1 PIF1 BN2166_0000260 BN2166_0000260 BN2166_0003640 BN2166_0003640 BN2166_0011250 BN2166_0011250 BN2166_0002940 BN2166_0002940 BN2166_0008900 BN2166_0008900 BN2166_0008450 BN2166_0008450 BN2166_0007500 BN2166_0007500 BN2166_0005250 BN2166_0005250 BN2166_0005200 BN2166_0005200 BN2166_0005150 BN2166_0005150 BN2166_0002750 BN2166_0002750 BN2166_0054080 BN2166_0054080 BN2166_0073200 BN2166_0073200 KU80 KU80 BN2166_0073070 BN2166_0073070 BN2166_0072770 BN2166_0072770 BN2166_0072470 BN2166_0072470 BN2166_0069170 BN2166_0069170 BN2166_0068670 BN2166_0068670 BN2166_0064920 BN2166_0064920 BN2166_0063270 BN2166_0063270 BN2166_0062020 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BN2166_0038730 BN2166_0037810 BN2166_0037810 BN2166_0023620 BN2166_0023620 BN2166_0036510 BN2166_0036510 BN2166_0036580 BN2166_0036580 BN2166_0022570 BN2166_0022570 BN2166_0039440 BN2166_0039440 BN2166_0038290 BN2166_0038290 BN2166_0020770 BN2166_0020770 BN2166_0045950 BN2166_0045950 BN2166_0037440 BN2166_0037440 BN2166_0037390 BN2166_0037390 BN2166_0032610 BN2166_0032610 BN2166_0032580 BN2166_0032580 BN2166_0032380 BN2166_0032380 BN2166_0031710 BN2166_0031710 BN2166_0009960 BN2166_0009960 BN2166_0035640 BN2166_0035640 BN2166_0017520 BN2166_0017520
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0031010SNF2 family N-terminal domain-domain containing protein. (1329 aa)
BN2166_0042650Timeless protein-domain containing protein. (1214 aa)
BN2166_0030660DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (485 aa)
BN2166_0030460BY PROTMAP: gi|342321067|gb|EGU13005.1| putative Hst3 protein [Rhodotorula glutinis ATCC 204091]. (509 aa)
BN2166_0041650annotation not available (489 aa)
BN2166_0015970DUF1767 domain-containing protein. (430 aa)
BN2166_0028160Replication factor C subunit 4. (438 aa)
BN2166_0028130FGENESH: predicted gene_5.358 protein. (325 aa)
BN2166_0027730Putative DNA helicase INO80. (1591 aa)
BN2166_0039050Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (620 aa)
BN2166_0013720Chromatin modification-related protein. (403 aa)
BN2166_0026010P-loop containing nucleoside triphosphate hydrolase protein. (1185 aa)
BN2166_0011870annotation not available (1800 aa)
BN2166_0028340annotation not available (925 aa)
BN2166_0025130WD_REPEATS_REGION domain-containing protein. (1955 aa)
BN2166_0010270FGENESH: predicted gene_2.196 protein. (1656 aa)
BN2166_0035600DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1012 aa)
BN2166_0026990annotation not available (1030 aa)
BN2166_0009520Histone H2A; Belongs to the histone H2A family. (161 aa)
BN2166_0022560BY PROTMAP: gi|814539372|emb|CEQ43229.1| SPOSA6832_05140 [Sporidiobolus salmonicolor]. (726 aa)
BN2166_0008370MAGE family-domain containing protein. (425 aa)
BN2166_0008270annotation not available (138 aa)
BN2166_0008170Checkpoint protein; Belongs to the HUS1 family. (295 aa)
BN2166_0007270annotation not available (1075 aa)
BN2166_0021260Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (570 aa)
BN2166_0006320Rad51-associated protein Brh2. (1137 aa)
BN2166_0023890annotation not available (374 aa)
BN2166_0023090BY PROTMAP: gi|342319803|gb|EGU11749.1| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]. (564 aa)
BN2166_0019410BY PROTMAP: gi|342320107|gb|EGU12050.1| Endopeptidase [Rhodotorula glutinis ATCC 204091]; Belongs to the AAA ATPase family. (409 aa)
BN2166_0022640DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
BN2166_0019260ATP-dependent DNA helicase; Belongs to the helicase family. (867 aa)
BN2166_0031250Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones. (732 aa)
BN2166_0022240FGENESH: predicted gene_3.675 protein. (157 aa)
BN2166_0004570DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (345 aa)
BN2166_0004420RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (467 aa)
BN2166_0004120annotation not available (1050 aa)
BN2166_0003470FGENESH: predicted gene_1.347 protein. (673 aa)
BN2166_0018230Histone H2A; Belongs to the histone H2A family. (83 aa)
BN2166_0020340annotation not available (1209 aa)
BN2166_0002820P-loop containing nucleoside triphosphate hydrolase protein. (297 aa)
BN2166_0020240annotation not available (633 aa)
BN2166_0017230General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (451 aa)
BN2166_0017180Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (346 aa)
BN2166_0028300Uncharacterized protein. (423 aa)
BN2166_0028100Protein kinase domain-containing protein. (302 aa)
BN2166_0016830DNA glycosylase. (442 aa)
BN2166_0016730FGENESH: predicted gene_3.124 protein. (789 aa)
BN2166_0018540Uncharacterized protein. (512 aa)
BN2166_0015980BY PROTMAP: gi|342319127|gb|EGU11078.1| Hst3 protein [Rhodotorula glutinis ATCC 204091]. (711 aa)
BN2166_0026100Putative RFC3-DNA replication factor C, 40 kDa subunit. (357 aa)
BN2166_0016890DNA polymerase subunit Cdc27. (418 aa)
BN2166_0016440RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (496 aa)
BN2166_0025450Sld5 domain-containing protein. (249 aa)
BN2166_0014180annotation not available (1032 aa)
BN2166_0015840FGENESH: predicted gene_3.35 protein. (295 aa)
BN2166_0013580FGENESH: predicted gene_2.527 protein. (658 aa)
BN2166_0023950DNA helicase; Belongs to the MCM family. (1074 aa)
BN2166_0010510Pol II transcription elongation factor. (587 aa)
BN2166_0010060WLM domain-domain containing protein. (336 aa)
BN2166_0011180BY PROTMAP: gi|342319958|gb|EGU11903.1| RAD51-like protein 2 ISS [Rhodotorula glutinis ATCC 204091]. (297 aa)
BN2166_0013540BY PROTMAP: gi|342321418|gb|EGU13352.1| Pyruvate carboxylase [Rhodotorula glutinis ATCC 204091]. (310 aa)
BN2166_0010430annotation not available (330 aa)
BN2166_0012140DNA polymerase. (1990 aa)
BN2166_0020800annotation not available (287 aa)
BN2166_0009230annotation not available (173 aa)
BN2166_0009130Restriction endonuclease type II-like protein. (332 aa)
BN2166_0011190DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1245 aa)
BN2166_0010040DNA helicase; Belongs to the MCM family. (2462 aa)
BN2166_0009540Histone H2A; Belongs to the histone H2A family. (132 aa)
BN2166_0004360zf-RING-like domain-containing protein. (425 aa)
BN2166_0007690FGENESH: predicted gene_1.769 protein. (1389 aa)
BN2166_0006890Fe2OG dioxygenase domain-containing protein. (418 aa)
BN2166_0015600annotation not available (1265 aa)
BN2166_0002310DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (364 aa)
BN2166_0002260DNA polymerase. (1555 aa)
BN2166_0013500FGENESH: predicted gene_2.519 protein. (560 aa)
BN2166_0012900DNA ligase. (1333 aa)
BN2166_0012700DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (613 aa)
PIF1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. (681 aa)
BN2166_0000260RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (467 aa)
BN2166_0003640annotation not available (731 aa)
BN2166_0011250SNF2 family N-terminal domain-domain containing protein. (1158 aa)
BN2166_0002940annotation not available (115 aa)
BN2166_0008900XPC-binding domain-domain containing protein. (403 aa)
BN2166_0008450BY PROTMAP: gi|636745340|gb|AIA21643.1| KU70 [Rhodosporidium toruloides]. (706 aa)
BN2166_0007500CDC45 family. (736 aa)
BN2166_0005250BY PROTMAP: gi|342320736|gb|EGU12675.1| DNA ligase [Rhodotorula glutinis ATCC 204091]. (946 aa)
BN2166_0005200annotation not available (1304 aa)
BN2166_0005150annotation not available (663 aa)
BN2166_0002750BY PROTMAP: gi|342319357|gb|EGU11306.1| DNA repair protein rad5 [Rhodotorula glutinis ATCC 204091]. (918 aa)
BN2166_0054080Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
BN2166_0073200Serine/threonine-protein phosphatase. (306 aa)
KU80BY PROTMAP: gi|636745342|gb|AIA21644.1| KU80 [Rhodosporidium toruloides]. (922 aa)
BN2166_0073070Uncharacterized protein. (2352 aa)
BN2166_0072770Rad51 domain-containing protein. (361 aa)
BN2166_0072470annotation not available (815 aa)
BN2166_0069170FGENESH: predicted gene_15.198 protein. (1428 aa)
BN2166_0068670DNA ligase. (872 aa)
BN2166_0064920AAA_23 domain-containing protein. (197 aa)
BN2166_0063270Uracil-DNA glycosylase-like protein. (370 aa)
BN2166_0062020BY PROTMAP: gi|342319449|gb|EGU11397.1| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]. (1859 aa)
BN2166_0074460annotation not available (661 aa)
BN2166_0060370Uncharacterized protein; Belongs to the actin family. (948 aa)
BN2166_0060170annotation not available (197 aa)
BN2166_0059270annotation not available (736 aa)
BN2166_0059220UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (123 aa)
BN2166_0074780FGENESH: predicted gene_20.1 protein. (596 aa)
BN2166_0071860annotation not available (184 aa)
BN2166_0071760BY PROTMAP: gi|342320802|gb|EGU12741.1| DNA polymerase lambda [Rhodotorula glutinis ATCC 204091]. (1020 aa)
BN2166_0057520DNA helicase; Belongs to the MCM family. (731 aa)
BN2166_0075140FGENESH: predicted gene_25.4 protein. (590 aa)
BN2166_0071730BY PROTMAP: gi|472588684|gb|EMS26156.1| UV DNA damage endonuclease [Rhodosporidium toruloides NP11]. (576 aa)
BN2166_0071680BY PROTMAP: gi|647396479|emb|CDR38723.1| RHTO0S03e12574g1_1 [Rhodosporidium toruloides]. (240 aa)
BN2166_0074890FGENESH: predicted gene_21.4 protein. (585 aa)
BN2166_0073090FGENESH: predicted gene_17.167 protein. (1943 aa)
BN2166_0054770ERCC4 domain-containing protein. (1060 aa)
BN2166_0067110Sister chromatid cohesion protein. (2042 aa)
BN2166_0054420BY PROTMAP: gi|647394313|emb|CDR35542.1| RHTO0S01e01640g1_1 [Rhodosporidium toruloides]. (404 aa)
BN2166_0068930Uncharacterized protein. (1118 aa)
BN2166_0071540annotation not available (527 aa)
BN2166_0065610FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (586 aa)
BN2166_0052620Histone acetyltransferase subunit NuA4-domain containing protein. (187 aa)
BN2166_0067080annotation not available (871 aa)
BN2166_0064910FGENESH: predicted gene_14.41 protein. (914 aa)
UNG1Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (351 aa)
BN2166_0051320N terminus of Rad21 / Rec8 like protein-domain containing protein. (698 aa)
BN2166_0075350FGENESH: predicted gene_29.4 protein. (581 aa)
BN2166_0063210Uracil-DNA glycosylase-like protein. (413 aa)
BN2166_0074850FGENESH: predicted gene_20.8 protein. (406 aa)
BN2166_0062910annotation not available (142 aa)
BN2166_0074450DNA repair protein, SNF2 family. (852 aa)
BN2166_0074350FGENESH: predicted gene_18.86 protein. (726 aa)
BN2166_0049570annotation not available (921 aa)
BN2166_0048770WD_REPEATS_REGION domain-containing protein. (1291 aa)
BN2166_0048520annotation not available (264 aa)
BN2166_0047320BY PROTMAP: gi|342319987|gb|EGU11932.1| putative Endonuclease [Rhodotorula glutinis ATCC 204091]. (1073 aa)
BN2166_0065140Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (382 aa)
BN2166_0059810zf-C2HE domain-containing protein. (234 aa)
BN2166_0046420Belongs to the RecA family. (319 aa)
BN2166_0064690BY PROTMAP: gi|342319058|gb|EGU11010.1| putative RAD57 protein [Rhodotorula glutinis ATCC 204091]. (556 aa)
BN2166_0058860Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (842 aa)
BN2166_0045720Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (743 aa)
BN2166_0060380BY PROTMAP: gi|472586258|gb|EMS23786.1| 3'-5' exonuclease [Rhodosporidium toruloides NP11]. (335 aa)
BN2166_0058010annotation not available (933 aa)
BN2166_0060030FGENESH: predicted gene_12.163 protein. (507 aa)
BN2166_0062590FGENESH: predicted gene_13.89 protein. (1342 aa)
BN2166_0069100Rad17 cell cycle checkpoint protein-domain containing protein. (797 aa)
BN2166_0055910annotation not available (256 aa)
BN2166_0066250annotation not available (1102 aa)
BN2166_0056380BY PROTMAP: gi|647399608|emb|CDR44506.1| RHTO0S09e05138g1_1 [Rhodosporidium toruloides]; Belongs to the PI3/PI4-kinase family. (3720 aa)
BN2166_0058590BY PROTMAP: gi|647398513|emb|CDR42529.1| RHTO0S07e00518g1_1 [Rhodosporidium toruloides]. (562 aa)
BN2166_0052760annotation not available (1447 aa)
BN2166_0064900Uncharacterized protein. (189 aa)
BN2166_0052610annotation not available (1535 aa)
BN2166_0052460Cir_N domain-containing protein. (402 aa)
BN2166_0052210annotation not available (547 aa)
BN2166_0054480annotation not available (875 aa)
BN2166_0054030Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (686 aa)
BN2166_0038720annotation not available (935 aa)
BN2166_0050960BY PROTMAP: gi|342321257|gb|EGU13191.1| YEATS family protein [Rhodotorula glutinis ATCC 204091]. (276 aa)
BN2166_0053080DNA helicase; Belongs to the MCM family. (880 aa)
BN2166_0062550TFIIH subunit Tfb4/p34. (347 aa)
BN2166_0052980annotation not available (730 aa)
BN2166_0052830DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2246 aa)
BN2166_0036720FGENESH: predicted gene_7.57 protein. (327 aa)
BN2166_0049110FGENESH: predicted gene_9.257 protein. (762 aa)
BN2166_0050480annotation not available (1056 aa)
BN2166_0047310Rad9-domain containing protein. (537 aa)
BN2166_0052190DNA mismatch repair protein MSH2; Component of the post-replicative DNA mismatch repair system (MMR). (986 aa)
BN2166_0049680annotation not available (493 aa)
BN2166_0046860Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (388 aa)
BN2166_0051940DNA_pol_B_exo1 domain-containing protein. (224 aa)
BN2166_0049230annotation not available (1250 aa)
BN2166_0050590BY PROTMAP: gi|647403136|emb|CDR49294.1| RHTO0S25e00650g1_1 [Rhodosporidium toruloides]; Belongs to the PI3/PI4-kinase family. (2634 aa)
BN2166_0049990DNA polymerase. (1118 aa)
BN2166_0045560Enhancer of polycomb-like protein. (949 aa)
BN2166_0031670BY PROTMAP: gi|342319608|gb|EGU11555.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (694 aa)
BN2166_0031420DNA_MISMATCH_REPAIR_2 domain-containing protein. (1020 aa)
BN2166_0044760Protein kinase-like domain-containing protein. (671 aa)
BN2166_0043710DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (402 aa)
BN2166_0030670DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (503 aa)
BN2166_0047540Uncharacterized protein. (1216 aa)
BN2166_0044580DNA helicase; Belongs to the MCM family. (939 aa)
BN2166_0043930BY PROTMAP: gi|342321555|gb|EGU13488.1| Hydrophilic protein [Rhodotorula glutinis ATCC 204091]. (370 aa)
BN2166_0053950DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (585 aa)
BN2166_00416606-O-methylguanine DNA methyltransferase, DNA binding domain-domain containing protein. (231 aa)
BN2166_0046090Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (798 aa)
BN2166_0052700FGENESH: predicted gene_10.107 protein. (1330 aa)
BN2166_0052500FGENESH: predicted gene_10.87 protein. (292 aa)
BN2166_0027720BY PROTMAP: gi|647399037|emb|CDR43407.1| RHTO0S08e01508g1_1 [Rhodosporidium toruloides]. (1125 aa)
BN2166_0027170SNF2 family N-terminal domain-domain containing protein. (1221 aa)
BN2166_0026870DNA-binding HORMA. (263 aa)
BN2166_0026720BY PROTMAP: gi|342320905|gb|EGU12843.1| Aspartate ammonia lyase [Rhodotorula glutinis ATCC 204091]. (477 aa)
BN2166_0026670FGENESH: predicted gene_5.212 protein. (360 aa)
BN2166_0039110annotation not available (838 aa)
BN2166_0026220BY PROTMAP: gi|342320882|gb|EGU12820.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (579 aa)
BN2166_0038760DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (733 aa)
BN2166_0038360Histone acetyltransferase type B catalytic subunit; Catalytic component of the histone acetylase B (HAT-B) complex. Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. Involved in DNA double-strand break repair; Belongs to the HAT1 family. (419 aa)
BN2166_0039530ATP-dependent 26S proteasome regulatory subunit; Belongs to the AAA ATPase family. (403 aa)
BN2166_0042140Putative DNA 3'-phosphatase Tpp1. (562 aa)
BN2166_0038730annotation not available (415 aa)
BN2166_0037810BY PROTMAP: gi|342320515|gb|EGU12455.1| glycosylase/lyase [Rhodotorula glutinis ATCC 204091]. (491 aa)
BN2166_0023620BY PROTMAP: gi|342319821|gb|EGU11767.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1641 aa)
BN2166_0036510annotation not available (1160 aa)
BN2166_0036580Chromosome segregation in meiosis protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (363 aa)
BN2166_0022570FGENESH: predicted gene_4.33 protein. (310 aa)
BN2166_0039440annotation not available (268 aa)
BN2166_0038290DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (773 aa)
BN2166_0020770Putative A/G-specific adenine DNA glycosylase. (666 aa)
BN2166_0045950Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. (3051 aa)
BN2166_0037440FPG_CAT domain-containing protein. (408 aa)
BN2166_0037390DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1189 aa)
BN2166_0032610Belongs to the cullin family. (803 aa)
BN2166_0032580Replication factor C subunit 1. (887 aa)
BN2166_0032380annotation not available (641 aa)
BN2166_0031710annotation not available (1090 aa)
BN2166_0009960Histone H2A; Belongs to the histone H2A family. (137 aa)
BN2166_0035640annotation not available (807 aa)
BN2166_0017520BY PROTMAP: gi|472583956|gb|EMS21572.1| DNA ligase [Rhodosporidium toruloides NP11]. (545 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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