Your Input: | |
| | BN2166_0016800 | annotation not available (1158 aa) |
| | BN2166_0011630 | Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] (100 aa) |
| | BN2166_0048390 | FGENESH: predicted gene_9.185 protein. (101 aa) |
| | BN2166_0056660 | Histone H2A; Belongs to the histone H2A family. (159 aa) |
| | BN2166_0009970 | Histone H2B; Belongs to the histone H2B family. (144 aa) |
| | BN2166_0002050 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (165 aa) |
| | BN2166_0002200 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (128 aa) |
| | BN2166_0002400 | RNA polymerase II-associated protein. (463 aa) |
| | BN2166_0002450 | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (211 aa) |
| | BN2166_0002750 | BY PROTMAP: gi|342319357|gb|EGU11306.1| DNA repair protein rad5 [Rhodotorula glutinis ATCC 204091]. (918 aa) |
| | BN2166_0005800 | BY PROTMAP: gi|342320713|gb|EGU12652.1| Mot1 [Rhodotorula glutinis ATCC 204091]. (2019 aa) |
| | BN2166_0010650 | 3'-5' exonuclease domain-containing protein. (966 aa) |
| | BN2166_0011250 | SNF2 family N-terminal domain-domain containing protein. (1158 aa) |
| | BN2166_0000260 | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (467 aa) |
| | BN2166_0000460 | annotation not available (224 aa) |
| | BN2166_0004080 | Leo1-like protein-domain containing protein. (552 aa) |
| | BN2166_0015550 | Uncharacterized protein. (514 aa) |
| | BN2166_0015600 | annotation not available (1265 aa) |
| | BN2166_0003560 | annotation not available (429 aa) |
| | BN2166_0004260 | annotation not available (783 aa) |
| | BN2166_0008440 | FGENESH: predicted gene_2.13 protein. (990 aa) |
| | BN2166_0008890 | annotation not available (1636 aa) |
| | BN2166_0017400 | FGENESH: predicted gene_3.191 protein. (1046 aa) |
| | BN2166_0005410 | FGENESH: predicted gene_1.541 protein. (1044 aa) |
| | BN2166_0018550 | annotation not available (929 aa) |
| | BN2166_0010040 | DNA helicase; Belongs to the MCM family. (2462 aa) |
| | BN2166_0008380 | Putative DNA polymerase. (210 aa) |
| | BN2166_0009280 | BY PROTMAP: gi|647397983|emb|CDR41493.1| RHTO0S06e02322g1_1 [Rhodosporidium toruloides]. (1311 aa) |
| | BN2166_0009780 | BY PROTMAP: gi|342319889|gb|EGU11834.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (274 aa) |
| | BN2166_0008510 | BY PROTMAP: gi|647397902|emb|CDR41309.1| RHTO0S06e00562g1_1 [Rhodosporidium toruloides]. (623 aa) |
| | BN2166_0022050 | FK506-binding protein. (395 aa) |
| | BN2166_0010810 | SNF2 family N-terminal domain-domain containing protein. (896 aa) |
| | BN2166_0015980 | BY PROTMAP: gi|342319127|gb|EGU11078.1| Hst3 protein [Rhodotorula glutinis ATCC 204091]. (711 aa) |
| | BN2166_0016080 | WD-40 repeat-containing protein. (478 aa) |
| | BN2166_0015210 | FGENESH: predicted gene_2.690 protein. (782 aa) |
| | BN2166_0027950 | annotation not available (813 aa) |
| | BN2166_0002270 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (102 aa) |
| | BN2166_0018080 | Histone H2B; Belongs to the histone H2B family. (138 aa) |
| | BN2166_0018210 | Histone H2B; Belongs to the histone H2B family. (125 aa) |
| | BN2166_0004420 | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (467 aa) |
| | BN2166_0018560 | FGENESH: predicted gene_3.307 protein. (351 aa) |
| | BN2166_0031250 | Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones. (732 aa) |
| | BN2166_0019410 | BY PROTMAP: gi|342320107|gb|EGU12050.1| Endopeptidase [Rhodotorula glutinis ATCC 204091]; Belongs to the AAA ATPase family. (409 aa) |
| | BN2166_0031300 | Belongs to the actin family. (794 aa) |
| | BN2166_0019910 | SCA7, zinc-binding domain-domain containing protein. (337 aa) |
| | BN2166_0021260 | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (570 aa) |
| | BN2166_0007720 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (142 aa) |
| | BN2166_0021780 | annotation not available (1558 aa) |
| | BN2166_0021660 | E3 ubiquitin protein ligase. (879 aa) |
| | BN2166_0008620 | Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. (570 aa) |
| | BN2166_0022830 | annotation not available (1277 aa) |
| | BN2166_0022560 | BY PROTMAP: gi|814539372|emb|CEQ43229.1| SPOSA6832_05140 [Sporidiobolus salmonicolor]. (726 aa) |
| | BN2166_0026990 | annotation not available (1030 aa) |
| | BN2166_0026160 | annotation not available (596 aa) |
| | BN2166_0038800 | Regulator ustilago maydis 1 protein. (1045 aa) |
| | BN2166_0027060 | Uncharacterized protein. (479 aa) |
| | BN2166_0013720 | Chromatin modification-related protein. (403 aa) |
| | BN2166_0027730 | Putative DNA helicase INO80. (1591 aa) |
| | BN2166_0031440 | FGENESH: predicted gene_6.66 protein. (1054 aa) |
| | BN2166_0027980 | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (109 aa) |
| | BN2166_0039750 | Histone acetyltransferases subunit 3-domain containing protein. (702 aa) |
| | BN2166_0040900 | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1342 aa) |
| | BN2166_0029630 | annotation not available (1156 aa) |
| | BN2166_0034190 | WD_REPEATS_REGION domain-containing protein. (567 aa) |
| | BN2166_0030460 | BY PROTMAP: gi|342321067|gb|EGU13005.1| putative Hst3 protein [Rhodotorula glutinis ATCC 204091]. (509 aa) |
| | BN2166_0031010 | SNF2 family N-terminal domain-domain containing protein. (1329 aa) |
| | BN2166_0042900 | Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1809 aa) |
| | BN2166_0031710 | annotation not available (1090 aa) |
| | BN2166_0044150 | annotation not available (1957 aa) |
| | BN2166_0032630 | BY PROTMAP: gi|342319639|gb|EGU11586.1| Smarcc1 protein [Rhodotorula glutinis ATCC 204091]. (643 aa) |
| | BN2166_0044450 | annotation not available (322 aa) |
| | BN2166_0032610 | Belongs to the cullin family. (803 aa) |
| | BN2166_0045950 | Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. (3051 aa) |
| | BN2166_0038290 | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (773 aa) |
| | BN2166_0035310 | BY PROTMAP: gi|647397374|emb|CDR40350.1| RHTO0S05e02102g1_1 [Rhodosporidium toruloides]. (1298 aa) |
| | BN2166_0035560 | FGENESH: predicted gene_6.478 protein. (390 aa) |
| | BN2166_0035810 | BY PROTMAP: gi|342319767|gb|EGU11714.1| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]. (907 aa) |
| | BN2166_0022020 | Belongs to the nucleosome assembly protein (NAP) family. (436 aa) |
| | BN2166_0036110 | Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (1004 aa) |
| | BN2166_0036430 | FGENESH: predicted gene_7.28 protein. (841 aa) |
| | BN2166_0022570 | FGENESH: predicted gene_4.33 protein. (310 aa) |
| | BN2166_0038360 | Histone acetyltransferase type B catalytic subunit; Catalytic component of the histone acetylase B (HAT-B) complex. Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. Involved in DNA double-strand break repair; Belongs to the HAT1 family. (419 aa) |
| | BN2166_0043140 | annotation not available (712 aa) |
| | BN2166_0027170 | SNF2 family N-terminal domain-domain containing protein. (1221 aa) |
| | BN2166_0052000 | BY PROTMAP: gi|647394568|emb|CDR35799.1| RHTO0S01e07360g1_1 [Rhodosporidium toruloides]. (942 aa) |
| | BN2166_0028420 | FGENESH: predicted gene_5.387 protein. (743 aa) |
| | BN2166_0042730 | FGENESH: predicted gene_8.128 protein. (1218 aa) |
| | BN2166_0046090 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (798 aa) |
| | BN2166_0046190 | FGENESH: predicted gene_8.474 protein. (614 aa) |
| | BN2166_0046290 | annotation not available (243 aa) |
| | BN2166_0044830 | BY PROTMAP: gi|727140648|emb|CEG76916.1| Putative Histone deacetylase RPD3 [Rhizopus microsporus]. (118 aa) |
| | BN2166_0047940 | BY PROTMAP: gi|342321379|gb|EGU13313.1| ATPase [Rhodotorula glutinis ATCC 204091]. (1497 aa) |
| | BN2166_0047990 | annotation not available (1095 aa) |
| | BN2166_0046130 | BY PROTMAP: gi|342319424|gb|EGU11373.1| Histone deacetylase clr3 [Rhodotorula glutinis ATCC 204091]. (881 aa) |
| | BN2166_0044710 | BY PROTMAP: gi|342321520|gb|EGU13453.1| Helicase SWR1 [Rhodotorula glutinis ATCC 204091]. (1703 aa) |
| | BN2166_0049290 | Putative methyltransferase-domain containing protein. (307 aa) |
| | BN2166_0050590 | BY PROTMAP: gi|647403136|emb|CDR49294.1| RHTO0S25e00650g1_1 [Rhodosporidium toruloides]; Belongs to the PI3/PI4-kinase family. (2634 aa) |
| | BN2166_0058350 | annotation not available (862 aa) |
| | BN2166_0051140 | Structural maintenance of chromosomes protein. (1205 aa) |
| | BN2166_0058800 | YL1 nuclear protein-domain containing protein. (642 aa) |
| | BN2166_0049230 | annotation not available (1250 aa) |
| | BN2166_0049430 | SNF5 / SMARCB1 / INI1-domain containing protein. (924 aa) |
| | BN2166_0034870 | annotation not available (163 aa) |
| | BN2166_0049680 | annotation not available (493 aa) |
| | BN2166_0035570 | RNA-dependent RNA polymerase. (712 aa) |
| | BN2166_0050480 | annotation not available (1056 aa) |
| | BN2166_0060750 | annotation not available (1433 aa) |
| | BN2166_0049310 | annotation not available (216 aa) |
| | BN2166_0055640 | RNA-dependent RNA polymerase. (805 aa) |
| | BN2166_0050960 | BY PROTMAP: gi|342321257|gb|EGU13191.1| YEATS family protein [Rhodotorula glutinis ATCC 204091]. (276 aa) |
| | BN2166_0051160 | annotation not available (795 aa) |
| | BN2166_0038720 | annotation not available (935 aa) |
| | BN2166_0056390 | Proteophosphoglycan 5. (403 aa) |
| | BN2166_0052210 | annotation not available (547 aa) |
| | BN2166_0052560 | Chromatin modification-related protein. (355 aa) |
| | BN2166_0065050 | Putative acetylpolyamine aminohydrolase. (353 aa) |
| | BN2166_0065150 | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (722 aa) |
| | BN2166_0053460 | Mss4-like protein. (356 aa) |
| | BN2166_0058590 | BY PROTMAP: gi|647398513|emb|CDR42529.1| RHTO0S07e00518g1_1 [Rhodosporidium toruloides]. (562 aa) |
| | BN2166_0057180 | annotation not available (453 aa) |
| | BN2166_0060290 | Set1 complex component ash2. (586 aa) |
| | BN2166_0060790 | annotation not available (488 aa) |
| | BN2166_0058530 | annotation not available (621 aa) |
| | BN2166_0061590 | BY PROTMAP: gi|472586134|gb|EMS23662.1| nucleus protein [Rhodosporidium toruloides NP11]. (198 aa) |
| | BN2166_0044820 | FGENESH: predicted gene_8.337 protein. (196 aa) |
| | BN2166_0060030 | FGENESH: predicted gene_12.163 protein. (507 aa) |
| | BN2166_0045520 | SAGA-associated factor 11. (358 aa) |
| | BN2166_0064040 | RAD26-like SNF2 family DNA-dependent ATPase. (1445 aa) |
| | BN2166_0070900 | NAD-dependent protein deacetylase; Belongs to the sirtuin family. Class I subfamily. (385 aa) |
| | BN2166_0062060 | annotation not available (513 aa) |
| | BN2166_0067690 | annotation not available (661 aa) |
| | BN2166_0049920 | annotation not available (884 aa) |
| | BN2166_0065030 | Chromatin modification-related protein. (502 aa) |
| | BN2166_0074450 | DNA repair protein, SNF2 family. (852 aa) |
| | BN2166_0063310 | Histone chaperone, ASF1-like protein. (213 aa) |
| | BN2166_0069440 | YT521-B-like domain-domain containing protein. (1084 aa) |
| | BN2166_0069840 | BY PROTMAP: gi|647403688|emb|CDR49772.1| RHTO0S32e00540g1_1 [Rhodosporidium toruloides]. (515 aa) |
| | BN2166_0052320 | FGENESH: predicted gene_10.69 protein. (535 aa) |
| | BN2166_0052620 | Histone acetyltransferase subunit NuA4-domain containing protein. (187 aa) |
| | BN2166_0065610 | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (586 aa) |
| | BN2166_0072040 | WD40-repeat-containing domain protein. (422 aa) |
| | BN2166_0069280 | HIT-type domain-containing protein. (191 aa) |
| | BN2166_0055020 | FGENESH: predicted gene_10.339 protein; Belongs to the actin family. (580 aa) |
| | BN2166_0068260 | FGENESH: predicted gene_15.107 protein. (1346 aa) |
| | BN2166_0055820 | BY PROTMAP: gi|647399668|emb|CDR44569.1| RHTO0S09e06414g1_1 [Rhodosporidium toruloides]. (1940 aa) |
| | BN2166_0057520 | DNA helicase; Belongs to the MCM family. (731 aa) |
| | BN2166_0059220 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (123 aa) |
| | BN2166_0060370 | Uncharacterized protein; Belongs to the actin family. (948 aa) |
| | BN2166_0062020 | BY PROTMAP: gi|342319449|gb|EGU11397.1| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]. (1859 aa) |
| | BN2166_0070420 | Belongs to the nucleosome assembly protein (NAP) family. (278 aa) |
| | BN2166_0072170 | tRNA dimethylallyltransferase. (556 aa) |
| | BN2166_0073070 | Uncharacterized protein. (2352 aa) |
| | BN2166_0073970 | BY PROTMAP: gi|647401014|emb|CDR46937.1| RHTO0S13e03774g1_1 [Rhodosporidium toruloides]. (300 aa) |
