30 items (Rhodotorula toruloides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

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protein homology

Your Input:
	BN2166_0052280	S1/P1 nuclease. (376 aa)
	BN2166_0040580	Tyrosine phosphatase family-domain containing protein. (202 aa)
	BN2166_0038110	annotation not available (926 aa)
	BN2166_0041140	Protein phosphatase; Belongs to the PP2C family. (412 aa)
	BN2166_0034560	Uncharacterized protein. (533 aa)
	BN2166_0035190	annotation not available (1205 aa)
	BN2166_0030710	Protein-tyrosine phosphatase-like protein. (823 aa)
	BN2166_0028960	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (817 aa)
	BN2166_0072670	BY PROTMAP: gi\|814543531\|emb\|CEQ39224.1\| SPOSA6832_00735 [Sporidiobolus salmonicolor]. (177 aa)
	BN2166_0072580	annotation not available (400 aa)
	BN2166_0069930	Protein phosphatase 2C (PP2C)-like domain-containing protein. (344 aa)
	BN2166_0062010	FGENESH: predicted gene_13.31 protein. (345 aa)
	BN2166_0066690	annotation not available (463 aa)
	BN2166_0062150	annotation not available (376 aa)
	BN2166_0072000	BY PROTMAP: gi\|342320789\|gb\|EGU12728.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]. (1449 aa)
	BN2166_0054330	BY PROTMAP: gi\|647394322\|emb\|CDR35551.1\| RHTO0S01e01838g1_1 [Rhodosporidium toruloides]. (534 aa)
	BN2166_0059940	annotation not available (229 aa)
	BN2166_0044470	Uncharacterized protein. (322 aa)
	BN2166_0057560	BY PROTMAP: gi\|647399476\|emb\|CDR44299.1\| RHTO0S09e02190g1_1 [Rhodosporidium toruloides]. (402 aa)
	BN2166_0005690	Protein-tyrosine phosphatase-like protein. (396 aa)
	BN2166_0006180	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]. (970 aa)
	BN2166_0011930	BY PROTMAP: gi\|647394773\|emb\|CDR36007.1\| RHTO0S01e12134g1_1 [Rhodosporidium toruloides]. (607 aa)
	BN2166_0031200	BY PROTMAP: gi\|647403364\|emb\|CDR49492.1\| RHTO0S27e00804g2_1 [Rhodosporidium toruloides]. (1109 aa)
	BN2166_0026140	Phosphotyrosine protein phosphatase I superfamily. (158 aa)
	BN2166_0025780	annotation not available (482 aa)
	BN2166_0031490	BY PROTMAP: gi\|342319595\|gb\|EGU11542.1\| PTPc [Rhodotorula glutinis ATCC 204091]. (647 aa)
	BN2166_0043840	annotation not available (906 aa)
	BN2166_0045990	Serine/threonine-protein phosphatase. (571 aa)
	BN2166_0047980	FGENESH: predicted gene_9.144 protein. (677 aa)
	BN2166_0049260	BY PROTMAP: gi\|647396700\|emb\|CDR39139.1\| RHTO0S04e02146g1_1 [Rhodosporidium toruloides]. (398 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0005690	BN2166_0031200	A0A0K3C7A3	A0A0K3CBY6	Protein-tyrosine phosphatase-like protein.	BY PROTMAP: gi\|647403364\|emb\|CDR49492.1\| RHTO0S27e00804g2_1 [Rhodosporidium toruloides].	0.802
BN2166_0006180	BN2166_0030710	A0A0K3C803	A0A0K3CFA7	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	Protein-tyrosine phosphatase-like protein.	0.430
BN2166_0006180	BN2166_0031200	A0A0K3C803	A0A0K3CBY6	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	BY PROTMAP: gi\|647403364\|emb\|CDR49492.1\| RHTO0S27e00804g2_1 [Rhodosporidium toruloides].	0.401
BN2166_0006180	BN2166_0072670	A0A0K3C803	A0A0K3CVR4	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	BY PROTMAP: gi\|814543531\|emb\|CEQ39224.1\| SPOSA6832_00735 [Sporidiobolus salmonicolor].	0.549
BN2166_0011930	BN2166_0072000	A0A0K3C9M3	A0A0K3CP06	BY PROTMAP: gi\|647394773\|emb\|CDR36007.1\| RHTO0S01e12134g1_1 [Rhodosporidium toruloides].	BY PROTMAP: gi\|342320789\|gb\|EGU12728.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	0.503
BN2166_0025780	BN2166_0026140	A0A0K3CDN9	A0A0K3CCW7	annotation not available	Phosphotyrosine protein phosphatase I superfamily.	0.639
BN2166_0025780	BN2166_0040580	A0A0K3CDN9	A0A0K3CHT2	annotation not available	Tyrosine phosphatase family-domain containing protein.	0.952
BN2166_0025780	BN2166_0059940	A0A0K3CDN9	A0A0K3CMD3	annotation not available	annotation not available	0.951
BN2166_0026140	BN2166_0025780	A0A0K3CCW7	A0A0K3CDN9	Phosphotyrosine protein phosphatase I superfamily.	annotation not available	0.639
BN2166_0026140	BN2166_0035190	A0A0K3CCW7	A0A0K3CFC5	Phosphotyrosine protein phosphatase I superfamily.	annotation not available	0.434
BN2166_0026140	BN2166_0040580	A0A0K3CCW7	A0A0K3CHT2	Phosphotyrosine protein phosphatase I superfamily.	Tyrosine phosphatase family-domain containing protein.	0.639
BN2166_0026140	BN2166_0054330	A0A0K3CCW7	A0A0K3CLI7	Phosphotyrosine protein phosphatase I superfamily.	BY PROTMAP: gi\|647394322\|emb\|CDR35551.1\| RHTO0S01e01838g1_1 [Rhodosporidium toruloides].	0.438
BN2166_0026140	BN2166_0059940	A0A0K3CCW7	A0A0K3CMD3	Phosphotyrosine protein phosphatase I superfamily.	annotation not available	0.639
BN2166_0028960	BN2166_0035190	A0A0K3CET9	A0A0K3CFC5	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.	annotation not available	0.620
BN2166_0028960	BN2166_0038110	A0A0K3CET9	A0A0K3CHD7	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.	annotation not available	0.428
BN2166_0028960	BN2166_0049260	A0A0K3CET9	A0A0K3CKS9	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.	BY PROTMAP: gi\|647396700\|emb\|CDR39139.1\| RHTO0S04e02146g1_1 [Rhodosporidium toruloides].	0.574
BN2166_0030710	BN2166_0006180	A0A0K3CFA7	A0A0K3C803	Protein-tyrosine phosphatase-like protein.	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	0.430
BN2166_0030710	BN2166_0034560	A0A0K3CFA7	A0A0K3CGE1	Protein-tyrosine phosphatase-like protein.	Uncharacterized protein.	0.453
BN2166_0030710	BN2166_0038110	A0A0K3CFA7	A0A0K3CHD7	Protein-tyrosine phosphatase-like protein.	annotation not available	0.768
BN2166_0030710	BN2166_0044470	A0A0K3CFA7	A0A0K3CN27	Protein-tyrosine phosphatase-like protein.	Uncharacterized protein.	0.430

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