11 items (Rhodotorula toruloides) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Predicted Interactions

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Your Input:
	BN2166_0034560	Uncharacterized protein. (533 aa)
	BN2166_0047980	FGENESH: predicted gene_9.144 protein. (677 aa)
	BN2166_0052280	S1/P1 nuclease. (376 aa)
	BN2166_0062150	annotation not available (376 aa)
	BN2166_0059940	annotation not available (229 aa)
	BN2166_0044470	Uncharacterized protein. (322 aa)
	BN2166_0062010	FGENESH: predicted gene_13.31 protein. (345 aa)
	BN2166_0006180	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]. (970 aa)
	BN2166_0025780	annotation not available (482 aa)
	BN2166_0031490	BY PROTMAP: gi\|342319595\|gb\|EGU11542.1\| PTPc [Rhodotorula glutinis ATCC 204091]. (647 aa)
	BN2166_0030710	Protein-tyrosine phosphatase-like protein. (823 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0006180	BN2166_0030710	A0A0K3C803	A0A0K3CFA7	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	Protein-tyrosine phosphatase-like protein.	0.430
BN2166_0025780	BN2166_0059940	A0A0K3CDN9	A0A0K3CMD3	annotation not available	annotation not available	0.951
BN2166_0030710	BN2166_0006180	A0A0K3CFA7	A0A0K3C803	Protein-tyrosine phosphatase-like protein.	BY PROTMAP: gi\|342320697\|gb\|EGU12636.1\| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091].	0.430
BN2166_0030710	BN2166_0034560	A0A0K3CFA7	A0A0K3CGE1	Protein-tyrosine phosphatase-like protein.	Uncharacterized protein.	0.453
BN2166_0030710	BN2166_0044470	A0A0K3CFA7	A0A0K3CN27	Protein-tyrosine phosphatase-like protein.	Uncharacterized protein.	0.430
BN2166_0030710	BN2166_0047980	A0A0K3CFA7	A0A0K3CJV6	Protein-tyrosine phosphatase-like protein.	FGENESH: predicted gene_9.144 protein.	0.435
BN2166_0030710	BN2166_0052280	A0A0K3CFA7	A0A0K3CL07	Protein-tyrosine phosphatase-like protein.	S1/P1 nuclease.	0.428
BN2166_0030710	BN2166_0062010	A0A0K3CFA7	A0A0K3CPG6	Protein-tyrosine phosphatase-like protein.	FGENESH: predicted gene_13.31 protein.	0.435
BN2166_0030710	BN2166_0062150	A0A0K3CFA7	A0A0K3CL38	Protein-tyrosine phosphatase-like protein.	annotation not available	0.435
BN2166_0034560	BN2166_0030710	A0A0K3CGE1	A0A0K3CFA7	Uncharacterized protein.	Protein-tyrosine phosphatase-like protein.	0.453
BN2166_0044470	BN2166_0030710	A0A0K3CN27	A0A0K3CFA7	Uncharacterized protein.	Protein-tyrosine phosphatase-like protein.	0.430
BN2166_0047980	BN2166_0030710	A0A0K3CJV6	A0A0K3CFA7	FGENESH: predicted gene_9.144 protein.	Protein-tyrosine phosphatase-like protein.	0.435
BN2166_0052280	BN2166_0030710	A0A0K3CL07	A0A0K3CFA7	S1/P1 nuclease.	Protein-tyrosine phosphatase-like protein.	0.428
BN2166_0059940	BN2166_0025780	A0A0K3CMD3	A0A0K3CDN9	annotation not available	annotation not available	0.951
BN2166_0062010	BN2166_0030710	A0A0K3CPG6	A0A0K3CFA7	FGENESH: predicted gene_13.31 protein.	Protein-tyrosine phosphatase-like protein.	0.435
BN2166_0062150	BN2166_0030710	A0A0K3CL38	A0A0K3CFA7	annotation not available	Protein-tyrosine phosphatase-like protein.	0.435

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