STRINGSTRING
BN2166_0060370 BN2166_0060370 BN2166_0002450 BN2166_0002450 BN2166_0000380 BN2166_0000380 BN2166_0000260 BN2166_0000260 BN2166_0000460 BN2166_0000460 BN2166_0003930 BN2166_0003930 BN2166_0018550 BN2166_0018550 BN2166_0004420 BN2166_0004420 BN2166_0018560 BN2166_0018560 BN2166_0021260 BN2166_0021260 BN2166_0021560 BN2166_0021560 BN2166_0040900 BN2166_0040900 BN2166_0038360 BN2166_0038360 BN2166_0051000 BN2166_0051000 BN2166_0049130 BN2166_0049130 BN2166_0049230 BN2166_0049230 BN2166_0049680 BN2166_0049680 BN2166_0050480 BN2166_0050480 BN2166_0050960 BN2166_0050960 BN2166_0039620 BN2166_0039620 BN2166_0052210 BN2166_0052210 BN2166_0052560 BN2166_0052560 BN2166_0065150 BN2166_0065150 BN2166_0056380 BN2166_0056380 BN2166_0049920 BN2166_0049920 BN2166_0068220 BN2166_0068220 BN2166_0065030 BN2166_0065030 BN2166_0063310 BN2166_0063310 BN2166_0052620 BN2166_0052620 BN2166_0054420 BN2166_0054420
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0060370Uncharacterized protein; Belongs to the actin family. (948 aa)
BN2166_0002450Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (211 aa)
BN2166_0000380Atypical/TAF1 protein kinase. (1147 aa)
BN2166_0000260RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (467 aa)
BN2166_0000460annotation not available (224 aa)
BN2166_0003930Uncharacterized protein. (862 aa)
BN2166_0018550annotation not available (929 aa)
BN2166_0004420RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (467 aa)
BN2166_0018560FGENESH: predicted gene_3.307 protein. (351 aa)
BN2166_0021260Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (570 aa)
BN2166_0021560SGF29 C-terminal domain-containing protein. (338 aa)
BN2166_0040900Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1342 aa)
BN2166_0038360Histone acetyltransferase type B catalytic subunit; Catalytic component of the histone acetylase B (HAT-B) complex. Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. Involved in DNA double-strand break repair; Belongs to the HAT1 family. (419 aa)
BN2166_0051000TPR domain-containing protein. (2015 aa)
BN2166_0049130annotation not available (219 aa)
BN2166_0049230annotation not available (1250 aa)
BN2166_0049680annotation not available (493 aa)
BN2166_0050480annotation not available (1056 aa)
BN2166_0050960BY PROTMAP: gi|342321257|gb|EGU13191.1| YEATS family protein [Rhodotorula glutinis ATCC 204091]. (276 aa)
BN2166_0039620BY PROTMAP: gi|342320443|gb|EGU12383.1| Spt3 [Rhodotorula glutinis ATCC 204091]. (421 aa)
BN2166_0052210annotation not available (547 aa)
BN2166_0052560Chromatin modification-related protein. (355 aa)
BN2166_0065150Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (722 aa)
BN2166_0056380BY PROTMAP: gi|647399608|emb|CDR44506.1| RHTO0S09e05138g1_1 [Rhodosporidium toruloides]; Belongs to the PI3/PI4-kinase family. (3720 aa)
BN2166_0049920annotation not available (884 aa)
BN2166_0068220annotation not available (488 aa)
BN2166_0065030Chromatin modification-related protein. (502 aa)
BN2166_0063310Histone chaperone, ASF1-like protein. (213 aa)
BN2166_0052620Histone acetyltransferase subunit NuA4-domain containing protein. (187 aa)
BN2166_0054420BY PROTMAP: gi|647394313|emb|CDR35542.1| RHTO0S01e01640g1_1 [Rhodosporidium toruloides]. (404 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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