STRINGSTRING
BN2166_0041910 BN2166_0041910 BN2166_0037600 BN2166_0037600 BN2166_0046640 BN2166_0046640 BN2166_0002400 BN2166_0002400 BN2166_0008600 BN2166_0008600 A0A0K3C5N9 A0A0K3C5N9 BN2166_0000530 BN2166_0000530 BN2166_0003390 BN2166_0003390 BN2166_0003740 BN2166_0003740 BN2166_0011700 BN2166_0011700 BN2166_0013700 BN2166_0013700 BN2166_0005040 BN2166_0005040 BN2166_0004080 BN2166_0004080 BN2166_0014450 BN2166_0014450 BN2166_0003060 BN2166_0003060 BN2166_0005760 BN2166_0005760 BN2166_0009490 BN2166_0009490 BN2166_0006260 BN2166_0006260 BN2166_0010090 BN2166_0010090 BN2166_0019850 BN2166_0019850 BN2166_0013090 BN2166_0013090 BN2166_0010510 BN2166_0010510 BN2166_0012630 BN2166_0012630 BN2166_0011310 BN2166_0011310 BN2166_0025400 BN2166_0025400 BN2166_0013810 BN2166_0013810 BN2166_0014360 BN2166_0014360 BN2166_0017690 BN2166_0017690 BN2166_0017940 BN2166_0017940 BN2166_0003020 BN2166_0003020 BN2166_0003970 BN2166_0003970 BN2166_0022690 BN2166_0022690 BN2166_0019510 BN2166_0019510 BN2166_0005820 BN2166_0005820 BN2166_0006320 BN2166_0006320 BN2166_0006820 BN2166_0006820 BN2166_0035050 BN2166_0035050 BN2166_0023830 BN2166_0023830 BN2166_0035500 BN2166_0035500 BN2166_0024180 BN2166_0024180 BN2166_0036400 BN2166_0036400 BN2166_0036500 BN2166_0036500 BN2166_0025360 BN2166_0025360 BN2166_0025880 BN2166_0025880 BN2166_0011970 BN2166_0011970 BN2166_0012470 BN2166_0012470 BN2166_0012570 BN2166_0012570 BN2166_0026460 BN2166_0026460 BN2166_0027160 BN2166_0027160 BN2166_0014170 BN2166_0014170 BN2166_0027880 BN2166_0027880 BN2166_0027980 BN2166_0027980 BN2166_0040250 BN2166_0040250 BN2166_0040350 BN2166_0040350 BN2166_0032990 BN2166_0032990 BN2166_0034990 BN2166_0034990 BN2166_0017820 BN2166_0017820 BN2166_0018170 BN2166_0018170 BN2166_0018520 BN2166_0018520 BN2166_0018570 BN2166_0018570 BN2166_0018920 BN2166_0018920 BN2166_0032610 BN2166_0032610 BN2166_0033710 BN2166_0033710 BN2166_0045950 BN2166_0045950 BN2166_0046250 BN2166_0046250 BN2166_0021170 BN2166_0021170 BN2166_0039790 BN2166_0039790 BN2166_0036260 BN2166_0036260 BN2166_0036360 BN2166_0036360 BN2166_0037030 BN2166_0037030 BN2166_0040590 BN2166_0040590 BN2166_0040640 BN2166_0040640 BN2166_0038080 BN2166_0038080 BN2166_0024970 BN2166_0024970 BN2166_0025420 BN2166_0025420 BN2166_0038610 BN2166_0038610 BN2166_0044340 BN2166_0044340 BN2166_0029020 BN2166_0029020 BN2166_0042310 BN2166_0042310 BN2166_0043010 BN2166_0043010 BN2166_0055900 BN2166_0055900 BN2166_0044460 BN2166_0044460 BN2166_0056550 BN2166_0056550 BN2166_0031870 BN2166_0031870 BN2166_0057050 BN2166_0057050 BN2166_0057150 BN2166_0057150 BN2166_0032520 BN2166_0032520 BN2166_0057800 BN2166_0057800 BN2166_0049830 BN2166_0049830 BN2166_0052490 BN2166_0052490 BN2166_0035620 BN2166_0035620 BN2166_0048460 BN2166_0048460 BN2166_0051480 BN2166_0051480 BN2166_0037570 BN2166_0037570 BN2166_0055740 BN2166_0055740 BN2166_0038320 BN2166_0038320 BN2166_0038970 BN2166_0038970 BN2166_0063700 BN2166_0063700 BN2166_0051510 BN2166_0051510 BN2166_0064700 BN2166_0064700 BN2166_0040220 BN2166_0040220 BN2166_0059090 BN2166_0059090 BN2166_0057930 BN2166_0057930 BN2166_0061240 BN2166_0061240 BN2166_0057010 BN2166_0057010 BN2166_0057260 BN2166_0057260 BN2166_0057360 BN2166_0057360 BN2166_0057410 BN2166_0057410 BN2166_0063590 BN2166_0063590 BN2166_0058960 BN2166_0058960 BN2166_0047470 BN2166_0047470 BN2166_0048570 BN2166_0048570 BN2166_0061360 BN2166_0061360 BN2166_0048920 BN2166_0048920 BN2166_0073300 BN2166_0073300 BN2166_0067240 BN2166_0067240 BN2166_0065580 BN2166_0065580 BN2166_0063360 BN2166_0063360 BN2166_0065160 BN2166_0065160 BN2166_0067830 BN2166_0067830 BN2166_0068680 BN2166_0068680 BN2166_0073690 BN2166_0073690 BN2166_0073940 BN2166_0073940 BN2166_0069460 BN2166_0069460 BN2166_0056820 BN2166_0056820 BN2166_0070760 BN2166_0070760 BN2166_0060970 BN2166_0060970 BN2166_0063370 BN2166_0063370 BN2166_0064220 BN2166_0064220 BN2166_0064870 BN2166_0064870 BN2166_0072420 BN2166_0072420 BN2166_0072670 BN2166_0072670
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0041910BY PROTMAP: gi|814541231|emb|CEQ41447.1| SPOSA6832_03156, partial [Sporidiobolus salmonicolor]; Belongs to the cullin family. (873 aa)
BN2166_0037600Nuclear transport factor 2. (124 aa)
BN2166_0046640Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (90 aa)
BN2166_0002400RNA polymerase II-associated protein. (463 aa)
BN2166_0008600Uncharacterized protein. (235 aa)
A0A0K3C5N9annotation not available (799 aa)
BN2166_0000530annotation not available (1222 aa)
BN2166_0003390annotation not available (153 aa)
BN2166_0003740annotation not available (972 aa)
BN2166_0011700BY PROTMAP: gi|647394802|emb|CDR36036.1| RHTO0S01e12772g1_1 [Rhodosporidium toruloides]. (993 aa)
BN2166_0013700ARM repeat-containing protein. (2569 aa)
BN2166_0005040Uncharacterized protein. (150 aa)
BN2166_0004080Leo1-like protein-domain containing protein. (552 aa)
BN2166_0014450FGENESH: predicted gene_2.614 protein. (372 aa)
BN2166_0003060ATP-dependent Clp protease proteolytic subunit. (268 aa)
BN2166_0005760annotation not available (374 aa)
BN2166_0009490FGENESH: predicted gene_2.118 protein; Belongs to the histone H2A family. (664 aa)
BN2166_0006260Armadillo-type fold. (1078 aa)
BN2166_0010090Belongs to the ubiquitin-conjugating enzyme family. (111 aa)
BN2166_0019850FGENESH: predicted gene_3.436 protein. (855 aa)
BN2166_0013090FGENESH: predicted gene_2.478 protein. (388 aa)
BN2166_0010510Pol II transcription elongation factor. (587 aa)
BN2166_0012630FGENESH: predicted gene_2.432 protein. (1254 aa)
BN2166_0011310annotation not available (239 aa)
BN2166_0025400Uncharacterized protein. (363 aa)
BN2166_0013810annotation not available (810 aa)
BN2166_0014360BY PROTMAP: gi|647401247|emb|CDR47360.1| RHTO0S14e02542g1_1 [Rhodosporidium toruloides]. (348 aa)
BN2166_0017690RBR-type E3 ubiquitin transferase. (584 aa)
BN2166_0017940Clr2_transil domain-containing protein. (816 aa)
BN2166_0003020Uncharacterized protein. (346 aa)
BN2166_0003970annotation not available (1074 aa)
BN2166_0022690annotation not available (1085 aa)
BN2166_0019510ANAPC5 domain-containing protein. (680 aa)
BN2166_0005820Uncharacterized protein. (225 aa)
BN2166_0006320Rad51-associated protein Brh2. (1137 aa)
BN2166_0006820Putative guanyl nucleotide binding protein. (393 aa)
BN2166_0035050annotation not available (2645 aa)
BN2166_0023830Transcription factor iws1. (666 aa)
BN2166_0035500Camp-dependent protein kinase regulatory subunit. (551 aa)
BN2166_0024180annotation not available (904 aa)
BN2166_0036400annotation not available (404 aa)
BN2166_0036500FGENESH: predicted gene_7.35 protein. (205 aa)
BN2166_0025360Uncharacterized protein. (197 aa)
BN2166_0025880annotation not available (675 aa)
BN2166_0011970annotation not available (629 aa)
BN2166_0012470FGENESH: predicted gene_2.416 protein. (1531 aa)
BN2166_0012570annotation not available (410 aa)
BN2166_0026460BY PROTMAP: gi|342320894|gb|EGU12832.1| Co-chaperone [Rhodotorula glutinis ATCC 204091]. (573 aa)
BN2166_0027160Belongs to the cullin family. (746 aa)
BN2166_0014170Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (792 aa)
BN2166_0027880NPL4 family-domain containing protein. (745 aa)
BN2166_0027980Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (109 aa)
BN2166_0040250Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (106 aa)
BN2166_0040350Uncharacterized protein. (163 aa)
BN2166_0032990annotation not available (674 aa)
BN2166_0034990FGENESH: predicted gene_6.421 protein. (910 aa)
BN2166_001782026S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (1035 aa)
BN2166_0018170ATG11 domain-containing protein. (1462 aa)
BN2166_0018520Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (175 aa)
BN2166_0018570Uncharacterized protein. (230 aa)
BN2166_0018920annotation not available (915 aa)
BN2166_0032610Belongs to the cullin family. (803 aa)
BN2166_0033710Putative nuclear protein SNF4. (590 aa)
BN2166_0045950Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. (3051 aa)
BN2166_0046250annotation not available (742 aa)
BN2166_0021170PINc domain-containing protein. (1482 aa)
BN2166_0039790Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (364 aa)
BN2166_0036260FGENESH: predicted gene_7.11 protein. (438 aa)
BN2166_0036360annotation not available (375 aa)
BN2166_0037030annotation not available (795 aa)
BN2166_0040590Exocyst complex component Sec3-domain containing protein. (1164 aa)
BN2166_0040640FGENESH: predicted gene_7.449 protein. (534 aa)
BN2166_0038080V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (859 aa)
BN2166_0024970FGENESH: predicted gene_5.42 protein. (938 aa)
BN2166_0025420annotation not available (912 aa)
BN2166_0038610CUE domain-containing protein. (412 aa)
BN2166_0044340Belongs to the pirin family. (1845 aa)
BN2166_0029020Ubiquitin-related domain-containing protein. (154 aa)
BN2166_0042310FGENESH: predicted gene_8.86 protein. (1243 aa)
BN2166_004301026S proteasome non-ATPase regulatory subunit 1. (210 aa)
BN2166_0055900Rho-GAP domain-containing protein. (788 aa)
BN2166_0044460Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family. (1002 aa)
BN2166_0056550Rho type ras-related small GTPase. (194 aa)
BN2166_0031870annotation not available (2193 aa)
BN2166_0057050BRO1-like domain-domain containing protein. (965 aa)
BN2166_0057150Protein YIP. (305 aa)
BN2166_0032520BY PROTMAP: gi|647400045|emb|CDR45150.1| RHTO0S10e05556g1_1 [Rhodosporidium toruloides]; Belongs to the DOCK family. (2133 aa)
BN2166_0057800WD repeat-containing protein. (744 aa)
BN2166_0049830Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (199 aa)
BN2166_0052490Small ubiquitin-related modifier. (102 aa)
BN2166_0035620annotation not available (1023 aa)
BN2166_0048460annotation not available (606 aa)
BN2166_0051480FGENESH: predicted gene_9.494 protein. (127 aa)
BN2166_0037570TKL/TKL-ccin protein kinase. (1158 aa)
BN2166_0055740FGENESH: predicted gene_11.70 protein. (183 aa)
BN2166_0038320Adenylyl cyclase-associated protein; Belongs to the CAP family. (520 aa)
BN2166_0038970annotation not available (1282 aa)
BN2166_0063700Uncharacterized protein. (147 aa)
BN2166_0051510GDP dissociation inhibitor-domain containing protein. (595 aa)
BN2166_0064700annotation not available (235 aa)
BN2166_0040220BY PROTMAP: gi|814542956|emb|CEQ39987.1| SPOSA6832_01580 [Sporidiobolus salmonicolor]; Belongs to the ubiquitin-conjugating enzyme family. (145 aa)
BN2166_0059090Uncharacterized protein. (406 aa)
BN2166_0057930Mismatched base pair and cruciform DNA recognition protein. (104 aa)
BN2166_0061240annotation not available (523 aa)
BN2166_0057010annotation not available (308 aa)
BN2166_0057260Protein YIP. (305 aa)
BN2166_0057360Uncharacterized protein. (228 aa)
BN2166_0057410FGENESH: predicted gene_11.237 protein. (749 aa)
BN2166_0063590Belongs to the cyclin family. (472 aa)
BN2166_0058960FGENESH: predicted gene_12.56 protein. (1288 aa)
BN2166_0047470RBR-type E3 ubiquitin transferase. (885 aa)
BN2166_0048570FGENESH: predicted gene_9.203 protein. (308 aa)
BN2166_0061360Cdc37 C terminal domain-domain containing protein. (230 aa)
BN2166_0048920annotation not available (947 aa)
BN2166_0073300Catenin-beta-like, Arm-motif containing nuclear-domain containing protein. (660 aa)
BN2166_0067240BY PROTMAP: gi|342321083|gb|EGU13020.1| Alternative cyclin Pcl1 [Rhodotorula glutinis ATCC 204091]. (428 aa)
BN2166_0065580annotation not available (197 aa)
BN2166_0063360Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (280 aa)
BN2166_0065160Cell wall surface anchor family protein. (1981 aa)
BN2166_0067830FGENESH: predicted gene_15.64 protein. (72 aa)
BN2166_0068680Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (1106 aa)
BN2166_0073690FGENESH: predicted gene_18.20 protein. (144 aa)
BN2166_0073940annotation not available (866 aa)
BN2166_0069460RNA pol II accessory factor, Cdc73 family-domain containing protein. (452 aa)
BN2166_0056820annotation not available (214 aa)
BN2166_0070760Uncharacterized protein. (1111 aa)
BN2166_0060970annotation not available (561 aa)
BN2166_0063370annotation not available (860 aa)
BN2166_0064220annotation not available (126 aa)
BN2166_0064870BY PROTMAP: gi|814540119|emb|CEQ42520.1| SPOSA6832_04345, partial [Sporidiobolus salmonicolor]; Belongs to the cullin family. (782 aa)
BN2166_0072420Armadillo-type fold. (1058 aa)
BN2166_0072670BY PROTMAP: gi|814543531|emb|CEQ39224.1| SPOSA6832_00735 [Sporidiobolus salmonicolor]. (177 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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