6 items (Rhodotorula toruloides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

gene neighborhood

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co-expression

protein homology

Your Input:
	BN2166_0061580	Ubiquitin-protein ligase E3. (531 aa)
	BN2166_0040200	Vacuolar import and degradation protein-domain containing protein. (468 aa)
	BN2166_0037480	annotation not available (652 aa)
	BN2166_0044730	annotation not available (812 aa)
	BN2166_0030820	Competence/damage-inducible protein CinA. (664 aa)
	BN2166_0073240	Uncharacterized protein. (312 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0030820	BN2166_0037480	A0A0K3CJ52	A0A0K3CH17	Competence/damage-inducible protein CinA.	annotation not available	0.988
BN2166_0030820	BN2166_0040200	A0A0K3CJ52	A0A0K3CEL3	Competence/damage-inducible protein CinA.	Vacuolar import and degradation protein-domain containing protein.	0.965
BN2166_0030820	BN2166_0044730	A0A0K3CJ52	A0A0K3CIY6	Competence/damage-inducible protein CinA.	annotation not available	0.986
BN2166_0030820	BN2166_0061580	A0A0K3CJ52	A0A0K3CNP7	Competence/damage-inducible protein CinA.	Ubiquitin-protein ligase E3.	0.955
BN2166_0030820	BN2166_0073240	A0A0K3CJ52	A0A0K3CR40	Competence/damage-inducible protein CinA.	Uncharacterized protein.	0.986
BN2166_0037480	BN2166_0030820	A0A0K3CH17	A0A0K3CJ52	annotation not available	Competence/damage-inducible protein CinA.	0.988
BN2166_0037480	BN2166_0040200	A0A0K3CH17	A0A0K3CEL3	annotation not available	Vacuolar import and degradation protein-domain containing protein.	0.810
BN2166_0037480	BN2166_0044730	A0A0K3CH17	A0A0K3CIY6	annotation not available	annotation not available	0.951
BN2166_0037480	BN2166_0061580	A0A0K3CH17	A0A0K3CNP7	annotation not available	Ubiquitin-protein ligase E3.	0.952
BN2166_0037480	BN2166_0073240	A0A0K3CH17	A0A0K3CR40	annotation not available	Uncharacterized protein.	0.970
BN2166_0040200	BN2166_0030820	A0A0K3CEL3	A0A0K3CJ52	Vacuolar import and degradation protein-domain containing protein.	Competence/damage-inducible protein CinA.	0.965
BN2166_0040200	BN2166_0037480	A0A0K3CEL3	A0A0K3CH17	Vacuolar import and degradation protein-domain containing protein.	annotation not available	0.810
BN2166_0040200	BN2166_0044730	A0A0K3CEL3	A0A0K3CIY6	Vacuolar import and degradation protein-domain containing protein.	annotation not available	0.961
BN2166_0040200	BN2166_0061580	A0A0K3CEL3	A0A0K3CNP7	Vacuolar import and degradation protein-domain containing protein.	Ubiquitin-protein ligase E3.	0.847
BN2166_0040200	BN2166_0073240	A0A0K3CEL3	A0A0K3CR40	Vacuolar import and degradation protein-domain containing protein.	Uncharacterized protein.	0.953
BN2166_0044730	BN2166_0030820	A0A0K3CIY6	A0A0K3CJ52	annotation not available	Competence/damage-inducible protein CinA.	0.986
BN2166_0044730	BN2166_0037480	A0A0K3CIY6	A0A0K3CH17	annotation not available	annotation not available	0.951
BN2166_0044730	BN2166_0040200	A0A0K3CIY6	A0A0K3CEL3	annotation not available	Vacuolar import and degradation protein-domain containing protein.	0.961
BN2166_0044730	BN2166_0061580	A0A0K3CIY6	A0A0K3CNP7	annotation not available	Ubiquitin-protein ligase E3.	0.751
BN2166_0044730	BN2166_0073240	A0A0K3CIY6	A0A0K3CR40	annotation not available	Uncharacterized protein.	0.981

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