STRINGSTRING
BN2166_0000260 BN2166_0000260 BN2166_0004420 BN2166_0004420 BN2166_0021260 BN2166_0021260 BN2166_0013720 BN2166_0013720 BN2166_0045560 BN2166_0045560 BN2166_0049230 BN2166_0049230 BN2166_0049680 BN2166_0049680 BN2166_0050480 BN2166_0050480 BN2166_0050960 BN2166_0050960 BN2166_0052210 BN2166_0052210 BN2166_0065150 BN2166_0065150 BN2166_0056380 BN2166_0056380 BN2166_0057180 BN2166_0057180 BN2166_0052620 BN2166_0052620 BN2166_0060370 BN2166_0060370
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0000260RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (467 aa)
BN2166_0004420RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (467 aa)
BN2166_0021260Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (570 aa)
BN2166_0013720Chromatin modification-related protein. (403 aa)
BN2166_0045560Enhancer of polycomb-like protein. (949 aa)
BN2166_0049230annotation not available (1250 aa)
BN2166_0049680annotation not available (493 aa)
BN2166_0050480annotation not available (1056 aa)
BN2166_0050960BY PROTMAP: gi|342321257|gb|EGU13191.1| YEATS family protein [Rhodotorula glutinis ATCC 204091]. (276 aa)
BN2166_0052210annotation not available (547 aa)
BN2166_0065150Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (722 aa)
BN2166_0056380BY PROTMAP: gi|647399608|emb|CDR44506.1| RHTO0S09e05138g1_1 [Rhodosporidium toruloides]; Belongs to the PI3/PI4-kinase family. (3720 aa)
BN2166_0057180annotation not available (453 aa)
BN2166_0052620Histone acetyltransferase subunit NuA4-domain containing protein. (187 aa)
BN2166_0060370Uncharacterized protein; Belongs to the actin family. (948 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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