STRINGSTRING
BN2166_0044460 BN2166_0044460 BN2166_0055980 BN2166_0055980 BN2166_0073350 BN2166_0073350 BN2166_0006650 BN2166_0006650 BN2166_0017800 BN2166_0017800 BN2166_0068880 BN2166_0068880 BN2166_0017950 BN2166_0017950 BN2166_0034600 BN2166_0034600 BN2166_0026030 BN2166_0026030 BN2166_0005100 BN2166_0005100
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0044460Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family. (1002 aa)
BN2166_0055980annotation not available (197 aa)
BN2166_0073350P-loop containing nucleoside triphosphate hydrolase protein. (821 aa)
BN2166_0006650annotation not available (234 aa)
BN2166_0017800annotation not available (811 aa)
BN2166_0068880FGENESH: predicted gene_15.169 protein. (195 aa)
BN2166_0017950Vacuolar assembling/sorting protein VPS16. (956 aa)
BN2166_0034600FGENESH: predicted gene_6.382 protein. (502 aa)
BN2166_0026030annotation not available (124 aa)
BN2166_0005100Belongs to the STXBP/unc-18/SEC1 family. (652 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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