(30 nodes) Phosphatidylinositol phosphate binding network (Rhodotorula toruloides)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BN2166_0002250	annotation not available (225 aa)
	BN2166_0007350	Uncharacterized protein. (746 aa)
	BN2166_0026900	annotation not available (2072 aa)
	BN2166_0021040	Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family. (661 aa)
	BN2166_0023040	Autophagy-related protein 2. (1970 aa)
	BN2166_0022330	annotation not available (241 aa)
	BN2166_0023030	annotation not available (447 aa)
	BN2166_0027990	annotation not available (2464 aa)
	BN2166_0027610	annotation not available (1073 aa)
	BN2166_0034440	NAC domain-domain containing protein. (150 aa)
	BN2166_0031410	PXA domain-domain containing protein. (472 aa)
	BN2166_0032110	annotation not available (1070 aa)
	BN2166_0019920	annotation not available (893 aa)
	BN2166_0036130	annotation not available (453 aa)
	BN2166_0040590	Exocyst complex component Sec3-domain containing protein. (1164 aa)
	BN2166_0051000	TPR domain-containing protein. (2015 aa)
	BN2166_0039360	annotation not available (635 aa)
	BN2166_0039810	Septin-type guanine nucleotide-binding (G) domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (321 aa)
	BN2166_0056950	annotation not available (510 aa)
	BN2166_0051280	FGENESH: predicted gene_9.474 protein. (799 aa)
	BN2166_0053830	Stress-activated map kinase interacting protein 1 (SIN1)-domain containing protein. (953 aa)
	BN2166_0058990	FUN14 family-domain containing protein. (227 aa)
	BN2166_0058180	Uncharacterized protein. (395 aa)
	BN2166_0046770	BY PROTMAP: gi\|342320021\|gb\|EGU11965.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (581 aa)
	BN2166_0063830	annotation not available (1545 aa)
	BN2166_0049770	BY PROTMAP: gi\|342321312\|gb\|EGU13246.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (530 aa)
	BN2166_0050520	FGENESH: predicted gene_9.398 protein. (555 aa)
	BN2166_0073290	BY PROTMAP: gi\|647395139\|emb\|CDR36340.1\| RHTO0S02e00650g1_1 [Rhodosporidium toruloides]. (701 aa)
	BN2166_0063570	annotation not available (628 aa)
	BN2166_0064270	BY PROTMAP: gi\|647402457\|emb\|CDR48713.1\| RHTO0S19e03026g1_1 [Rhodosporidium toruloides]. (1404 aa)

Your Current Organism:

Rhodotorula toruloides

NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN2166_0002250	BN2166_0022330	A0A0K3C469	A0A0K3CCS2	annotation not available	annotation not available	0.794
BN2166_0007350	BN2166_0036130	A0A0K3C5D7	A0A0K3CGN2	Uncharacterized protein.	annotation not available	0.441
BN2166_0007350	BN2166_0063830	A0A0K3C5D7	A0A0K3CP93	Uncharacterized protein.	annotation not available	0.996
BN2166_0019920	BN2166_0027610	A0A0K3CG07	A0A0K3CEC7	annotation not available	annotation not available	0.874
BN2166_0019920	BN2166_0056950	A0A0K3CG07	A0A0K3CJI9	annotation not available	annotation not available	0.746
BN2166_0021040	BN2166_0040590	A0A0K3CBH8	A0A0K3CGY4	Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family.	Exocyst complex component Sec3-domain containing protein.	0.992
BN2166_0022330	BN2166_0002250	A0A0K3CCS2	A0A0K3C469	annotation not available	annotation not available	0.794
BN2166_0022330	BN2166_0031410	A0A0K3CCS2	A0A0K3CFL0	annotation not available	PXA domain-domain containing protein.	0.713
BN2166_0022330	BN2166_0063830	A0A0K3CCS2	A0A0K3CP93	annotation not available	annotation not available	0.539
BN2166_0022330	BN2166_0073290	A0A0K3CCS2	A0A0K3CR44	annotation not available	BY PROTMAP: gi\|647395139\|emb\|CDR36340.1\| RHTO0S02e00650g1_1 [Rhodosporidium toruloides].	0.576
BN2166_0023040	BN2166_0036130	A0A0K3CC23	A0A0K3CGN2	Autophagy-related protein 2.	annotation not available	0.994
BN2166_0023040	BN2166_0050520	A0A0K3CC23	A0A0K3CPS7	Autophagy-related protein 2.	FGENESH: predicted gene_9.398 protein.	0.780
BN2166_0026900	BN2166_0051280	A0A0K3CAS2	A0A0K3CKQ1	annotation not available	FGENESH: predicted gene_9.474 protein.	0.899
BN2166_0027610	BN2166_0019920	A0A0K3CEC7	A0A0K3CG07	annotation not available	annotation not available	0.874
BN2166_0027610	BN2166_0046770	A0A0K3CEC7	A0A0K3CNS2	annotation not available	BY PROTMAP: gi\|342320021\|gb\|EGU11965.1\| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091].	0.823
BN2166_0027610	BN2166_0056950	A0A0K3CEC7	A0A0K3CJI9	annotation not available	annotation not available	0.771
BN2166_0027610	BN2166_0073290	A0A0K3CEC7	A0A0K3CR44	annotation not available	BY PROTMAP: gi\|647395139\|emb\|CDR36340.1\| RHTO0S02e00650g1_1 [Rhodosporidium toruloides].	0.623
BN2166_0027990	BN2166_0036130	A0A0K3CDF7	A0A0K3CGN2	annotation not available	annotation not available	0.612
BN2166_0027990	BN2166_0039360	A0A0K3CDF7	A0A0K3CHV1	annotation not available	annotation not available	0.516
BN2166_0031410	BN2166_0022330	A0A0K3CFL0	A0A0K3CCS2	PXA domain-domain containing protein.	annotation not available	0.713

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