STRINGSTRING
BN2166_0058590 BN2166_0058590 BN2166_0068820 BN2166_0068820 BN2166_0065470 BN2166_0065470 BN2166_0074240 BN2166_0074240 BN2166_0074190 BN2166_0074190 BN2166_0070430 BN2166_0070430 BN2166_0074150 BN2166_0074150 BN2166_0048920 BN2166_0048920 BN2166_0047770 BN2166_0047770 BN2166_0072000 BN2166_0072000 BN2166_0070700 BN2166_0070700 BN2166_0069100 BN2166_0069100 BN2166_0068350 BN2166_0068350 BN2166_0058130 BN2166_0058130 BN2166_0065250 BN2166_0065250 BN2166_0051060 BN2166_0051060 BN2166_0036470 BN2166_0036470 BN2166_0060000 BN2166_0060000 BN2166_0047310 BN2166_0047310 BN2166_0049930 BN2166_0049930 BN2166_0059300 BN2166_0059300 BN2166_0058050 BN2166_0058050 BN2166_0047880 BN2166_0047880 BN2166_0031670 BN2166_0031670 BN2166_0044760 BN2166_0044760 BN2166_0031070 BN2166_0031070 BN2166_0045430 BN2166_0045430 BN2166_0042240 BN2166_0042240 BN2166_0041690 BN2166_0041690 BN2166_0038110 BN2166_0038110 BN2166_0038730 BN2166_0038730 BN2166_0023620 BN2166_0023620 BN2166_0036730 BN2166_0036730 BN2166_0036580 BN2166_0036580 BN2166_0036530 BN2166_0036530 BN2166_0040240 BN2166_0040240 BN2166_0035180 BN2166_0035180 BN2166_0038840 BN2166_0038840 BN2166_0045950 BN2166_0045950 BN2166_0017670 BN2166_0017670 BN2166_0042650 BN2166_0042650 BN2166_0030710 BN2166_0030710 BN2166_0042300 BN2166_0042300 BN2166_0030580 BN2166_0030580 BN2166_0028330 BN2166_0028330 BN2166_0039200 BN2166_0039200 BN2166_0011020 BN2166_0011020 BN2166_0010420 BN2166_0010420 BN2166_0008170 BN2166_0008170 BN2166_0021680 BN2166_0021680 BN2166_0033550 BN2166_0033550 BN2166_0032950 BN2166_0032950 BN2166_0023440 BN2166_0023440 BN2166_0019760 BN2166_0019760 BN2166_0019610 BN2166_0019610 BN2166_0019510 BN2166_0019510 BN2166_0031250 BN2166_0031250 BN2166_0016210 BN2166_0016210 BN2166_0023450 BN2166_0023450 BN2166_0011930 BN2166_0011930 BN2166_0010480 BN2166_0010480 BN2166_0007410 BN2166_0007410 BN2166_0019750 BN2166_0019750 BN2166_0019600 BN2166_0019600 BN2166_0006380 BN2166_0006380 BN2166_0002460 BN2166_0002460 BN2166_0004330 BN2166_0004330 BN2166_0010750 BN2166_0010750 BN2166_0005150 BN2166_0005150 BN2166_0003450 BN2166_0003450 BN2166_0039680 BN2166_0039680 BN2166_0066570 BN2166_0066570
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0058590BY PROTMAP: gi|647398513|emb|CDR42529.1| RHTO0S07e00518g1_1 [Rhodosporidium toruloides]. (562 aa)
BN2166_0068820GAR domain-containing protein. (772 aa)
BN2166_0065470BY PROTMAP: gi|342319021|gb|EGU10973.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1208 aa)
BN2166_0074240BY PROTMAP: gi|647401048|emb|CDR46990.1| RHTO0S13e04478g1_1 [Rhodosporidium toruloides]; Belongs to the protein kinase superfamily. (294 aa)
BN2166_0074190WD40 repeat-like protein. (348 aa)
BN2166_0070430Protein kinase-like domain-containing protein. (533 aa)
BN2166_0074150BY PROTMAP: gi|342320357|gb|EGU12298.1| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]. (3016 aa)
BN2166_0048920annotation not available (947 aa)
BN2166_0047770Uncharacterized protein. (524 aa)
BN2166_0072000BY PROTMAP: gi|342320789|gb|EGU12728.1| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]. (1449 aa)
BN2166_0070700Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (319 aa)
BN2166_0069100Rad17 cell cycle checkpoint protein-domain containing protein. (797 aa)
BN2166_0068350annotation not available (1501 aa)
BN2166_0058130FGENESH: predicted gene_11.309 protein. (141 aa)
BN2166_0065250Uncharacterized protein. (259 aa)
BN2166_0051060annotation not available (1166 aa)
BN2166_0036470Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (859 aa)
BN2166_0060000WD40-repeat-containing domain protein. (599 aa)
BN2166_0047310Rad9-domain containing protein. (537 aa)
BN2166_0049930FGENESH: predicted gene_9.339 protein. (211 aa)
BN2166_0059300Cleft lip and palate associated transmembrane protein. (664 aa)
BN2166_0058050RING finger domain-containing protein. (128 aa)
BN2166_0047880annotation not available (1235 aa)
BN2166_0031670BY PROTMAP: gi|342319608|gb|EGU11555.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (694 aa)
BN2166_0044760Protein kinase-like domain-containing protein. (671 aa)
BN2166_0031070P-loop containing nucleoside triphosphate hydrolase protein. (687 aa)
BN2166_0045430Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (328 aa)
BN2166_0042240BY PROTMAP: gi|342321621|gb|EGU13554.1| HORMA domain protein [Rhodotorula glutinis ATCC 204091]. (224 aa)
BN2166_0041690BY PROTMAP: gi|342321638|gb|EGU13571.1| Cysteine synthase [Rhodotorula glutinis ATCC 204091]. (379 aa)
BN2166_0038110annotation not available (926 aa)
BN2166_0038730annotation not available (415 aa)
BN2166_0023620BY PROTMAP: gi|342319821|gb|EGU11767.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1641 aa)
BN2166_0036730BY PROTMAP: gi|342320560|gb|EGU12500.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1448 aa)
BN2166_0036580Chromosome segregation in meiosis protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (363 aa)
BN2166_0036530Putative 20S cyclosome subunit BimA/Nuc2/Cdc27. (921 aa)
BN2166_0040240BY PROTMAP: gi|342320419|gb|EGU12359.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1583 aa)
BN2166_0035180MRC1 domain-containing protein. (1494 aa)
BN2166_0038840BY PROTMAP: gi|342320475|gb|EGU12415.1| Bub2 protein [Rhodotorula glutinis ATCC 204091]. (324 aa)
BN2166_0045950Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. (3051 aa)
BN2166_0017670Protein kinase-like domain-containing protein. (1654 aa)
BN2166_0042650Timeless protein-domain containing protein. (1214 aa)
BN2166_0030710Protein-tyrosine phosphatase-like protein. (823 aa)
BN2166_0042300Cell division control protein 16. (727 aa)
BN2166_0030580annotation not available (518 aa)
BN2166_0028330FGENESH: predicted gene_5.378 protein. (732 aa)
BN2166_0039200annotation not available (929 aa)
BN2166_0011020FGENESH: predicted gene_2.271 protein. (1103 aa)
BN2166_0010420BY PROTMAP: gi|342319914|gb|EGU11859.1| Membrane protein [Rhodotorula glutinis ATCC 204091]. (1070 aa)
BN2166_0008170Checkpoint protein; Belongs to the HUS1 family. (295 aa)
BN2166_0021680BY PROTMAP: gi|342321674|gb|EGU13606.1| Wee1 [Rhodotorula glutinis ATCC 204091]. (1790 aa)
BN2166_0033550Thyroid receptor-interacting protein 13. (552 aa)
BN2166_0032950annotation not available (781 aa)
BN2166_0023440Belongs to the protein kinase superfamily. (351 aa)
BN2166_0019760annotation not available (230 aa)
BN2166_0019610Spindle assembly checkpoint component Mad1. (802 aa)
BN2166_0019510ANAPC5 domain-containing protein. (680 aa)
BN2166_0031250Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones. (732 aa)
BN2166_0016210annotation not available (705 aa)
BN2166_0023450Belongs to the ubiquitin-conjugating enzyme family. (184 aa)
BN2166_0011930BY PROTMAP: gi|647394773|emb|CDR36007.1| RHTO0S01e12134g1_1 [Rhodosporidium toruloides]. (607 aa)
BN2166_0010480Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (512 aa)
BN2166_0007410BY PROTMAP: gi|342319302|gb|EGU11251.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (1307 aa)
BN2166_0019750FGENESH: predicted gene_3.426 protein. (329 aa)
BN2166_0019600Dfp1/Him1, central region-domain containing protein. (719 aa)
BN2166_0006380annotation not available (428 aa)
BN2166_0002460BY PROTMAP: gi|814541099|emb|CEQ41539.1| SPOSA6832_03267 [Sporidiobolus salmonicolor]; Belongs to the cyclin family. (517 aa)
BN2166_0004330annotation not available (648 aa)
BN2166_0010750Uncharacterized protein. (927 aa)
BN2166_0005150annotation not available (663 aa)
BN2166_0003450annotation not available (402 aa)
BN2166_0039680Cell division control protein 42. (191 aa)
BN2166_0066570mRNA stability protein; Plays an essential role in initiation of the G0 program by preventing the degradation of specific nutrient-regulated mRNAs via the 5'-3' mRNA decay pathway. (139 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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