STRINGSTRING
BN2166_0070070 BN2166_0070070 BN2166_0070210 BN2166_0070210 BN2166_0039680 BN2166_0039680 BN2166_0010750 BN2166_0010750 BN2166_0015210 BN2166_0015210 BN2166_0032950 BN2166_0032950 BN2166_0033550 BN2166_0033550 BN2166_0021680 BN2166_0021680 BN2166_0011020 BN2166_0011020 BN2166_0039200 BN2166_0039200 BN2166_0038110 BN2166_0038110 BN2166_0044760 BN2166_0044760 BN2166_0047880 BN2166_0047880 BN2166_0051140 BN2166_0051140
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN2166_0070070FGENESH: predicted gene_16.33 protein. (668 aa)
BN2166_0070210Rho GTPase activation protein. (771 aa)
BN2166_0039680Cell division control protein 42. (191 aa)
BN2166_0010750Uncharacterized protein. (927 aa)
BN2166_0015210FGENESH: predicted gene_2.690 protein. (782 aa)
BN2166_0032950annotation not available (781 aa)
BN2166_0033550Thyroid receptor-interacting protein 13. (552 aa)
BN2166_0021680BY PROTMAP: gi|342321674|gb|EGU13606.1| Wee1 [Rhodotorula glutinis ATCC 204091]. (1790 aa)
BN2166_0011020FGENESH: predicted gene_2.271 protein. (1103 aa)
BN2166_0039200annotation not available (929 aa)
BN2166_0038110annotation not available (926 aa)
BN2166_0044760Protein kinase-like domain-containing protein. (671 aa)
BN2166_0047880annotation not available (1235 aa)
BN2166_0051140Structural maintenance of chromosomes protein. (1205 aa)
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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